Construct: ORF ccsbBroad304_13662

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009816.1_s304c1, BRDN0000408479
Derived from:
ccsbBroadEn_13662
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CFAP77 (389799)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13662
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 389799 CFAP77 cilia and flagella associat... NM_001282957.2 100% 100%
2 human 389799 CFAP77 cilia and flagella associat... XM_011518670.2 90.1% 83.2% (many diffs)
3 human 389799 CFAP77 cilia and flagella associat... NM_207417.3 88.7% 88.7% 194_301del
4 human 389799 CFAP77 cilia and flagella associat... XM_011518671.1 67.4% 61.2% (many diffs)
5 human 389799 CFAP77 cilia and flagella associat... XM_017014711.1 62.2% 61.6% (many diffs)
6 mouse 329375 Cfap77 cilia and flagella associat... XM_006498132.2 84.1% 87.6% (many diffs)
7 mouse 329375 Cfap77 cilia and flagella associat... NM_001166705.1 76.5% 70.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
921
ORF length:
852
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gccagaggcc aggagctccg gcccggacct cacgcgatgg aggaagcagc
121agcagcctgt gcgccgcacg gtcagccagg tctgcccgcc cccgcggcgg cccctgaccg
181tggcggacat ccgttccggc atggagaacg agcggctggg ggtcgtgcgg gactccatgt
241ttcagaaccc tctcatcgtc aaggctgaac tcggcaagcc ccgggaaaga agctacagtc
301tgcccggcat taattttaat tatggactct acatccgagg gcttgacgga ggagtccctg
361aagccatcgg acgctggaac gtgttcaagc agcagcccac ctgcccccac gagctgaccc
421ggaattatat cgcaatgaac cgcggggcgg tgaaagccgg cctggtgact gcccgggaga
481acttgctcta ccgtcagctc aatgacatcc gcatcagtga ccaggatgac cggcgcatga
541agaaagagcc gccccctctc cctccaaaca tgacatttgg gatccgggca cggccttcca
601cacccttctt tgatctgctg cagcaccggt acctgcagct gtgggtacag gaacaaaagg
661ccacccagaa agccatcaaa ctggagaaga agcagaaggt ggtccttggg aagctgtatg
721agacccggag cagtcagctg aggaagtaca agccgcccgt gaagctggac accctctggc
781acatgcctca cttccagaag gtgggccgcc accttgatac gttccccacg gaggccgatc
841gccagagagc attaaaagcc caccgggaag agtgtgccgt gcgccagggg accctgcgga
901tgggcaacta cacccacccc ttgccaactt tcttgtacaa agtggttggt aagcctatcc
961ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
1021ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)