Construct: ORF ccsbBroad304_14728

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018874.1_s304c1, BRDN0000459358
Derived from:
ccsbBroadEn_14728
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
PAK3 (5063)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14728
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128166.2 98.2% 44.6% (many diffs)
2 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128167.2 98.2% 44.6% (many diffs)
3 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324325.2 98.2% 44.6% (many diffs)
4 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324326.2 98.2% 44.6% (many diffs)
5 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324330.2 98.2% 44.6% (many diffs)
6 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324331.2 98.2% 44.6% (many diffs)
7 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324332.2 98.2% 44.6% (many diffs)
8 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324334.2 98.2% 44.6% (many diffs)
9 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_002578.5 98.2% 44.6% (many diffs)
10 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029561.2 98.2% 44.6% (many diffs)
11 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128173.3 95.5% 43.4% (many diffs)
12 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324327.2 95.5% 43.4% (many diffs)
13 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324328.2 95.5% 43.4% (many diffs)
14 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324329.2 95.5% 43.4% (many diffs)
15 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324333.2 95.5% 43.4% (many diffs)
16 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029557.1 95.5% 43.4% (many diffs)
17 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128172.2 94.5% 43% (many diffs)
18 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_005262133.3 93.4% 44.4% (many diffs)
19 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029558.1 93.4% 44.4% (many diffs)
20 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029559.1 93.4% 44.4% (many diffs)
21 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029560.1 93.4% 44.4% (many diffs)
22 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128168.3 92.1% 41.8% (many diffs)
23 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029563.1 92.1% 41.8% (many diffs)
24 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_005262132.2 90.9% 43.2% (many diffs)
25 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_006724654.2 90.9% 43.2% (many diffs)
26 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_006724655.2 90.9% 43.2% (many diffs)
27 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530962.1 90.9% 43.2% (many diffs)
28 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530967.2 90.9% 43.2% (many diffs)
29 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530968.2 90.9% 43.2% (many diffs)
30 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530969.1 90.9% 43.2% (many diffs)
31 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029562.1 90.4% 45.5% (many diffs)
32 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530971.2 54.3% 72.1% (many diffs)
33 human 5063 PAK3 p21 (RAC1) activated kinase 3 NR_136748.1 18.1% (many diffs)
34 human 5063 PAK3 p21 (RAC1) activated kinase 3 NR_136747.2 17.5% (many diffs)
35 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195049.1 90.8% 43.1% (many diffs)
36 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_008778.3 90.8% 43.1% (many diffs)
37 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528753.3 90.8% 43.1% (many diffs)
38 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528754.3 90.8% 43.1% (many diffs)
39 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_011247790.2 90.8% 43.1% (many diffs)
40 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195048.1 88.3% 42% (many diffs)
41 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528752.3 88.3% 42% (many diffs)
42 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318423.1 88.3% 42% (many diffs)
43 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195047.1 87.4% 41.5% (many diffs)
44 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195046.1 85.1% 40.5% (many diffs)
45 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528747.3 85.1% 40.5% (many diffs)
46 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318417.1 85.1% 40.5% (many diffs)
47 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318418.1 85.1% 40.5% (many diffs)
48 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318419.1 85.1% 40.5% (many diffs)
49 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318420.1 85.1% 40.5% (many diffs)
50 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318421.1 85.1% 40.5% (many diffs)
51 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318422.1 85.1% 40.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
810
ORF length:
741
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gtctgacggt ctggataatg aagagaaacc cccggctcct ccactgagga
121tgaatagtaa caaccgggat tcttcagcac tcaaccacag ctccaaacca cttcccatgg
181cccctgaaga gaagaataag aaagccaggc ttcgctctat cttcccagga ggaggggata
241aaaccaataa gaagaaggag aaagagcgcc cagagatctc tcttccttca gactttgagc
301atacgattca tgtggggttt gatgcagtca ccggggaatt cactggaatt ccagagcaat
361gggcacgatt actccaaact tccaacataa caaaattgga acagaagaag aacccacaag
421ctgttctaga tgttctcaaa ttctatgatt ccaaagaaac agtcaacaac cagaaataca
481tgagctttac atcaggagat aaaagtgcac atggatacat agcagcccat ccttcgagta
541caaaaacagc atctgagcct ccattggccc ctcctgtgtc tgaagaagaa gatgaagagg
601aagaagaaga agaagatgaa aatgagccac caccagttat cgcaccaaga ccagagcata
661caaaatcaat ctatactcgt tctgtggttg aatccattgc ttcaccagca gtaccaaata
721aagaggtcac accaccctct gctgaaaatg ccaattccag tactttgtac aggaacacag
781atcggcaaag aaaaaatcca gatgacagat gagagatctt agagagctag agcattgtga
841gtgtggggac ccaaagaaaa aataacacag atttgaaaaa ttggtcaagg ggcatcaggt
901actgtttata cagcactaga cattgcaaca ggacagaagg tggccataaa gcagatgacc
961ctccaacagc aaccccaaga aggantnatt attatgnaaa tctgtncatg aggaaaaata
1021gaaaccntaa tattgttaat atttagatag ctacttggtg ggtgatgaac tatgggtagt
1081catggaatac ttggctggtg gctctctgac tgatgtggtc acagagacct gtatggatga
1141aggacagata gcagctgtct gcagagagtg cctgcaagct ttggatttcc tgcactcaaa
1201ccaggtgatc catagagata taaagagtga caatattctt ctcgggatgg atggctctgt
1261taaattgact gactttgggt tctgtgccca gatcactcct gagcaaagta aacgaagcac
1321tatggtggga accccatatt ggatggcacc tgaggtggtg actcgaaaag cttatggtcc
1381gaaagttgat atctggtctc ttggaattat ggcaattgaa atggtggaag gtgaaccccc
1441ttaccttaat gaaaatccac tcagggcatt gtatctgata gccactaatg gaactccaga
1501gctccagaat cctgagagac tgtcagctgt attccgtgac tttttaaatc gctgtcttga
1561gatggatgtg gataggcgag gatctgccaa ggagcttttg cagcatccat ttttaaaatt
1621agccaagcct ctctccagcc tgactcctct gattatcgct gcaaaggaag caattaagaa
1681cagcagccgc ttgccaactt tcttgtacaa agtggttggt aagcctatcc ctaaccctct
1741cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac
1801aatcaacctc tggatta

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