Construct: ORF ccsbBroad304_15026

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017305.2_s304c1, BRDN0000459579
Derived from:
ccsbBroadEn_15026
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DSTYK (25778)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15026
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25778 DSTYK dual serine/threonine and t... NM_199462.3 99.9% 99.8% 1921T>C
2 human 25778 DSTYK dual serine/threonine and t... NM_015375.3 95.1% 95% 1921T>C;2467_2601del
3 human 25778 DSTYK dual serine/threonine and t... XM_011509392.2 94.1% 94% 625_626ins27;1894T>C;2440_2574del
4 human 25778 DSTYK dual serine/threonine and t... XM_011509393.2 72.8% 71.9% (many diffs)
5 human 25778 DSTYK dual serine/threonine and t... XM_011509394.2 72.1% 71.5% (many diffs)
6 mouse 213452 Dstyk dual serine/threonine and t... NM_172516.4 84.1% 86.6% (many diffs)
7 mouse 213452 Dstyk dual serine/threonine and t... XM_006529356.3 74.7% 77.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2718
ORF length:
2652
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga gggcgacggg gtgccatggg gcagcgagcc cgtctcgggt cccggccccg
121gcggcggcgg aatgatccgc gagctgtgcc ggggcttcgg ccgctaccgc cgctacctgg
181gacggctgcg acagaacctg cgcgagaccc agaagttctt ccgcgacatc aagtgctccc
241acaaccacac ttgtctctcc tccctcacgg gcggcggcgg ggccgagcgc ggccctgcag
301gcgatgtcgc cgaaaccggg ctgcaggcgg gccaactgag ctgcatttcc ttcccaccta
361aggaagagaa gtacctccag cagattgtgg actgcctccc ttgcatactg atcctcggcc
421aggattgtaa cgtcaagtgc cagctgttga atctgctgtt gggggtgcag gtgcttccca
481ccaccaagct gggcagtgag gagagctgta agcttcggcg cctccgcttc acctatggga
541ctcagactcg ggtcagcctg gcgctccctg gacagtatga actagtgcac acgctggttg
601ctcatcaggg caactgggag accatccctg aggaggatct ggaggtccaa gagaacaatg
661aggatgctgc tcatgtttta gcggaactgg aggtaacgat gcaccatgct ctcttacagg
721aagtggacgt tgtggtagca ccatgccaag gcctccggcc cacagtggat gttctgggtg
781acttggtgaa tgatttcttg cctgtgataa cctatgcact ccacaaagat gaactctctg
841agagggatga gcaagagctt caggaaatcc gaaagtattt ctcctttcct gtattctttt
901tcaaagtgcc gaaactgggc tcggagataa tagactcctc aaccaggaga atggagagcg
961aaagatcacc gctttatcgc cagctaattg acctgggcta tctgagcagc agtcactgga
1021actgtggggc tcctggccag gatactaaag ctcagagcat gttggtggaa cagagtgaaa
1081agctgagaca cttgagcaca ttttctcacc aggtgttaca gactcgcctg gtggatgcag
1141ccaaggccct gaacctggtg cactgccact gccttgacat ctttattaac caggcatttg
1201acatgcagcg ggacctgcag atcactccca aacgtctgga atatactcga aaaaaggaga
1261atgagttgta tgaatcattg atgaatattg ccaaccgaaa gcaggaggaa atgaaggata
1321tgattgttga gacacttaat accatgaagg aggaacttct ggatgatgct actaacatgg
1381agtttaaaga cgtcattgtc cctgagaatg gagaaccagt aggcaccaga gagatcaaat
1441gctgcatccg acagatccag gaactcatca tctcccgact taatcaggca gtggctaata
1501agctgatcag ctcagtggat tacctgaggg aaagcttcgt cggaaccctg gaacgatgtc
1561tgcagagcct ggagaagtct caggatgtct cagttcacat caccagtaat tatctcaaac
1621agatcttaaa tgctgcctat catgttgaag tcacgtttca ctcagggtcg tcagttacaa
1681ggatgctatg ggagcaaatc aaacagatca tccagcgcat cacatgggtg agcccacctg
1741ccatcactct ggaatggaag aggaaggtgg cccaggaagc cattgagagc ctcagcgcct
1801ccaaattggc taagagcatt tgcagccaat tccggactcg gctcaatagt tcccacgagg
1861cttttgcagc ctccttgcgg cagctggaag ctggccactc aggccggtta gagaaaacgg
1921aagatctatg gctgagggtt cggaaagatc atgctccccg cctggcccgc ctttctctgg
1981aaagccgttc tttacaggat gtcttgcttc atcgtaaacc taaactggga caggaactgg
2041gccggggcca gtatggtgtg gtatacctgt gtgacaactg gggaggacac ttcccttgtg
2101ccctcaaatc agttgtccct ccagatgaga agcactggaa tgatctggct ttggaatttc
2161actatatgag gtctctgccg aagcatgagc gattggtgga tctccatggt tcagtcattg
2221actacaacta tggtggtggc tccagcattg ctgtgctcct cattatggag cggctacacc
2281gggatctcta cacagggctg aaggctgggc tgaccctgga gacacgtttg cagatagcac
2341tagatgtggt ggagggaatc cgcttcctgc acagccaggg acttgtccat cgtgatatca
2401aactgaaaaa tgtgctgctg gataagcaga accgtgccaa gatcactgac ttaggattct
2461gcaagccaga ggccatgatg tcaggcagca ttgtggggac accaatccat atggcccctg
2521aacttttcac aggggctcgc ccagaacgtc ttcctgtgtt tgatgaggag tgctggcagt
2581tgatggaagc ctgttgggat ggcgacccct tgaagaggcc tctcttgggc attgtccagc
2641ccatgctcca gggcatcatg aatcggctct gcaagtccaa ttctgagcag ccaaacagag
2701gactagatga ttctacttnn ccaactttct tgtacaaagt ggttggtaag cctatcccta
2761accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
2821agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)