Construct: ORF ccsbBroadEn_00072

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005522.1_s300c1, BRDN0000389651
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANXA7 (310)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 310 ANXA7 annexin A7 NM_001156.5 100% 100%
2 human 310 ANXA7 annexin A7 XM_017016163.2 100% 100%
3 human 310 ANXA7 annexin A7 NM_004034.4 95.4% 95.4% 436_501del
4 human 310 ANXA7 annexin A7 XM_017016162.2 95.4% 95.4% 436_501del
5 human 310 ANXA7 annexin A7 NM_001320879.2 91.4% 91.4% 0_1ins120
6 human 310 ANXA7 annexin A7 NM_001320880.2 87.2% 87.2% 0_1ins120;316_381del
7 mouse 11750 Anxa7 annexin A7 NM_001110794.1 86.9% 92% (many diffs)
8 mouse 11750 Anxa7 annexin A7 NM_009674.3 86.9% 92% (many diffs)
9 mouse 11750 Anxa7 annexin A7 XM_006518452.2 83.2% 87.9% (many diffs)
10 mouse 11750 Anxa7 annexin A7 XM_006518453.3 83.2% 87.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1464
ORF length:
1398
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC ATACCCAGGC TATCCCCCAA CAGGCTACCC ACCTTTCCCT GGATATCCTC
121CTGCAGGTCA GGAGTCATCT TTTCCCCCTT CTGGTCAGTA TCCTTATCCT AGTGGCTTTC
181CTCCAATGGG AGGAGGTGCC TACCCACAAG TGCCAAGTAG TGGCTACCCA GGAGCTGGAG
241GCTACCCTGC GCCTGGAGGT TATCCAGCCC CTGGAGGCTA TCCTGGTGCC CCACAGCCAG
301GGGGAGCTCC ATCCTATCCC GGAGTTCCTC CAGGCCAAGG ATTTGGAGTC CCACCAGGTG
361GAGCAGGCTT TTCTGGGTAT CCACAGCCAC CTTCACAGTC TTATGGAGGT GGTCCAGCAC
421AGGTTCCACT ACCTGGTGGC TTTCCTGGAG GACAGATGCC TTCTCAGTAT CCTGGAGGAC
481AACCTACTTA CCCTAGTCAG CCTGCCACAG TGACTCAGGT CACTCAAGGA ACTATCCGAC
541CAGCTGCCAA CTTCGATGCT ATAAGAGATG CAGAAATTCT TCGTAAGGCA ATGAAGGGTT
601TTGGGACAGA TGAGCAGGCA ATTGTGGATG TGGTGGCCAA CCGTTCCAAT GATCAGAGGC
661AAAAAATTAA AGCAGCATTT AAGACCTCCT ATGGCAAGGA TTTAATCAAA GATCTCAAAT
721CAGAGTTAAG TGGAAATATG GAAGAACTGA TCCTGGCCCT CTTCATGCCT CCTACGTATT
781ACGATGCCTG GAGCTTACGG AAAGCAATGC AGGGAGCAGG AACTCAGGAA CGTGTATTGA
841TTGAGATTTT GTGCACAAGA ACAAATCAGG AAATCCGAGA AATTGTCAGA TGTTATCAGT
901CAGAATTTGG ACGAGACCTT GAAAAGGACA TTAGGTCAGA TACATCAGGA CATTTTGAAC
961GTTTACTTGT GTCCATGTGC CAGGGAAATC GTGATGAGAA CCAGAGTATA AACCACCAAA
1021TGGCTCAGGA AGATGCTCAG CGTCTCTATC AAGCTGGTGA GGGGAGACTA GGGACCGATG
1081AATCTTGCTT TAACATGATC CTTGCCACAA GAAGCTTTCC TCAGCTGAGA GCTACCATGG
1141AGGCTTATTC TAGGATGGCT AATCGAGACT TGTTAAGCAG TGTGAGCCGT GAGTTTTCCG
1201GATATGTAGA AAGTGGTTTG AAGACCATCT TGCAGTGTGC CCTGAACCGC CCTGCCTTCT
1261TTGCTGAGAG GCTCTACTAT GCTATGAAAG GTGCTGGCAC AGATGACTCC ACCCTGGTCC
1321GGATTGTGGT CACTCGAAGT GAGATTGACC TTGTACAAAT AAAACAGATG TTCGCTCAGA
1381TGTATCAGAA GACTCTGGGC ACAATGATTG CAGGTGACAC GAGTGGAGAT TACCGAAGAC
1441TTCTTCTGGC TATTGTGGGC CAGTACCCAA CTTTCTTGTA CAAAGTtggc attataagaa
1501agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)