Construct: ORF ccsbBroadEn_00654

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017273.1_s300c1, BRDN0000392641
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GNB1 (2782)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2782 GNB1 G protein subunit beta 1 NM_001282539.1 100% 100%
2 human 2782 GNB1 G protein subunit beta 1 NM_002074.5 100% 100%
3 human 2782 GNB1 G protein subunit beta 1 XM_017001059.2 100% 100%
4 human 2782 GNB1 G protein subunit beta 1 XM_017001060.2 100% 100%
5 human 2782 GNB1 G protein subunit beta 1 XM_017001061.2 100% 100%
6 human 2782 GNB1 G protein subunit beta 1 XM_024446495.1 100% 100%
7 human 2783 GNB2 G protein subunit beta 2 NM_005273.4 78.6% 90.2% (many diffs)
8 human 59345 GNB4 G protein subunit beta 4 NM_021629.4 75.9% 90.8% (many diffs)
9 human 2782 GNB1 G protein subunit beta 1 NM_001282538.1 70.5% 70.5% 0_1ins300
10 mouse 14688 Gnb1 guanine nucleotide binding ... NM_001160016.1 90.1% 100% (many diffs)
11 mouse 14688 Gnb1 guanine nucleotide binding ... NM_001160017.1 90.1% 100% (many diffs)
12 mouse 14688 Gnb1 guanine nucleotide binding ... NM_008142.4 90.1% 100% (many diffs)
13 mouse 14688 Gnb1 guanine nucleotide binding ... XM_017319977.2 90.1% 100% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1086
ORF length:
1020
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TGAGCTTGAC CAGTTACGGC AGGAGGCCGA GCAACTTAAG AACCAGATTC
121GAGACGCCAG GAAAGCATGT GCAGATGCAA CTCTCTCTCA GATCACAAAC AACATCGACC
181CAGTGGGAAG AATCCAAATG CGCACGAGGA GGACACTGCG GGGGCACCTG GCCAAGATCT
241ACGCCATGCA CTGGGGCACA GACTCCAGGC TTCTCGTCAG TGCCTCGCAG GATGGTAAAC
301TTATCATCTG GGACAGCTAC ACCACCAACA AGGTCCACGC CATCCCTCTG CGCTCCTCCT
361GGGTCATGAC CTGTGCATAT GCCCCTTCTG GGAACTATGT GGCCTGCGGT GGCCTGGATA
421ACATTTGCTC CATTTACAAT CTGAAAACTC GTGAGGGGAA CGTGCGCGTG AGTCGTGAGC
481TGGCAGGACA CACAGGTTAC CTGTCCTGCT GCCGATTCCT GGATGACAAT CAGATCGTCA
541CCAGCTCTGG AGACACCACG TGTGCCCTGT GGGACATCGA GACCGGCCAG CAGACGACCA
601CGTTTACCGG ACACACTGGA GATGTCATGA GCCTTTCTCT TGCTCCTGAC ACCAGACTGT
661TCGTCTCTGG TGCTTGTGAT GCTTCAGCCA AACTCTGGGA TGTGCGAGAA GGCATGTGCC
721GGCAGACCTT CACTGGCCAC GAGTCTGACA TCAATGCCAT TTGCTTCTTT CCAAATGGCA
781ATGCATTTGC CACTGGCTCA GACGACGCCA CCTGCAGGCT GTTTGACCTT CGTGCTGACC
841AGGAGCTCAT GACTTACTCC CATGACAACA TCATCTGCGG GATCACCTCT GTCTCCTTCT
901CCAAGAGCGG GCGCCTCCTC CTTGCTGGGT ACGACGACTT CAACTGCAAC GTCTGGGATG
961CACTCAAAGC CGACCGGGCA GGTGTCTTGG CTGGGCATGA CAACCGCGTC AGCTGCCTGG
1021GCGTGACTGA CGATGGCATG GCTGTGGCGA CAGGGTCCTG GGATAGCTTC CTCAAGATCT
1081GGAACTACCC AACTTTCTTG TACAAAGTtg gcattataag aaagcattgc ttatcaattt
1141gttgcaacga ac

Download FASTA (ORF) (Full)