Construct: ORF ccsbBroadEn_03947

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000829.1_s300c1, BRDN0000393241
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MTMR14 (64419)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64419 MTMR14 myotubularin related protei... NM_001077525.3 100% 100%
2 human 64419 MTMR14 myotubularin related protei... XM_005265400.2 96.1% 96.1% 819_820ins75
3 human 64419 MTMR14 myotubularin related protei... XM_017007034.1 92.1% 90% (many diffs)
4 human 64419 MTMR14 myotubularin related protei... NM_001077526.3 92% 92% 1613_1614ins156
5 human 64419 MTMR14 myotubularin related protei... XM_017007035.1 88.5% 86.3% (many diffs)
6 human 64419 MTMR14 myotubularin related protei... XM_017007038.2 88.1% 88.1% 819_820ins75;1538_1539ins156
7 human 64419 MTMR14 myotubularin related protei... XM_011534012.1 85.5% 84.1% 0_1ins133;26_27ins149
8 human 64419 MTMR14 myotubularin related protei... XM_017007036.1 84.5% 82.4% (many diffs)
9 human 64419 MTMR14 myotubularin related protei... NM_022485.5 82.7% 82.7% 1433_1434ins336
10 human 64419 MTMR14 myotubularin related protei... XM_017007041.1 81.6% 80.3% 0_1ins133;26_27ins149;537_538ins75
11 human 64419 MTMR14 myotubularin related protei... XM_011534013.1 81.3% 81.3% 0_1ins363
12 human 64419 MTMR14 myotubularin related protei... XM_017007037.1 80.8% 78.7% (many diffs)
13 human 64419 MTMR14 myotubularin related protei... XM_017007042.2 78.9% 78.9% 819_820ins75;1358_1359ins336
14 human 64419 MTMR14 myotubularin related protei... XM_017007043.1 77.5% 76.1% 0_1ins133;26_27ins149;1331_1332ins156
15 human 64419 MTMR14 myotubularin related protei... XM_017007039.1 75.7% 73.6% (many diffs)
16 human 64419 MTMR14 myotubularin related protei... XM_024453709.1 73.3% 73.3% 0_1ins363;1250_1251ins156
17 human 64419 MTMR14 myotubularin related protei... XM_017007040.1 72.1% 69.9% (many diffs)
18 human 64419 MTMR14 myotubularin related protei... XR_245152.2 71.2% 1_111del;1543_1544ins180;1882_2304del
19 human 64419 MTMR14 myotubularin related protei... XR_001740233.2 68.2% (many diffs)
20 human 64419 MTMR14 myotubularin related protei... XM_024453710.1 67% 67% 0_1ins642
21 human 64419 MTMR14 myotubularin related protei... XR_001740231.1 65.7% (many diffs)
22 human 64419 MTMR14 myotubularin related protei... XM_017007044.2 63.2% 63.2% 0_1ins642;177_178ins75
23 human 64419 MTMR14 myotubularin related protei... XR_001740232.1 62.9% (many diffs)
24 human 64419 MTMR14 myotubularin related protei... XM_017007045.2 59% 59% 0_1ins642;971_972ins156
25 mouse 97287 Mtmr14 myotubularin related protei... NM_026849.2 89.7% 90.3% (many diffs)
26 mouse 97287 Mtmr14 myotubularin related protei... XM_006506823.3 82.1% 83.2% (many diffs)
27 mouse 97287 Mtmr14 myotubularin related protei... XM_006506824.3 76.4% 65.4% (many diffs)
28 mouse 97287 Mtmr14 myotubularin related protei... XM_006506825.1 73.3% 73.6% (many diffs)
29 mouse 97287 Mtmr14 myotubularin related protei... XM_006506826.3 68.2% 62.5% (many diffs)
30 mouse 97287 Mtmr14 myotubularin related protei... XR_001785185.1 68% (many diffs)
31 mouse 97287 Mtmr14 myotubularin related protei... XR_377503.3 62% (many diffs)
32 mouse 97287 Mtmr14 myotubularin related protei... XM_006506827.3 60.5% 60.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2016
ORF length:
1950
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CGGCGCTCGG GCCGCCGCCG CCGCTGCCTC GGCGGGGTCC TCGGCCTCTT
121CAGGCAACCA GCCGCCTCAG GAGCTGGGGC TTGGGGAGCT GCTGGAGGAG TTCTCCCGGA
181CTCAGTACCG GGCCAAGGAT GGCAGCGGGA CCGGCGGCTC TAAGGTTGAG CGCATTGAGA
241AGAGATGTCT GGAGCTGTTT GGCCGAGACT ACTGTTTCAG CGTGATTCCA AACACGAATG
301GGGATATCTG TGGCCACTAT CCCCGGCACA TCGTGTTCCT GGAGTATGAG AGTTCTGAGA
361AGGAGAAAGA CACGTTTGAG AGTACCGTAC AGGTGAGCAA GTTGCAAGAC CTCATCCACC
421GCAGCAAGAT GGCCCGGTGC AGAGGACGGT TTGTCTGCCC AGTAATCCTG TTCAAGGGCA
481AGCACATTTG CAGGTCGGCC ACACTGGCTG GATGGGGAGA GCTGTATGGA CGCTCAGGCT
541ACAACTATTT TTTCTCAGGG GGTGCAGATG ATGCCTGGGC AGATGTGGAG GACGTCACGG
601AGGAGGACTG TGCTCTTCGA AGTGGTGACA CGCATCTTTT TGATAAGGTC AGAGGCTATG
661ACATCAAGCT GCTTCGATAC CTGTCAGTCA AATACATCTG TGACCTGATG GTGGAGAACA
721AGAAGGTGAA GTTTGGCATG AATGTAACCT CCTCTGAGAA GGTGGACAAA GCCCAGCGCT
781ATGCCGACTT CACTCTCCTC TCCATCCCGT ATCCAGGCTG TGAATTTTTC AAGGAATATA
841AAGATCGGGA TTACATGGCA GAAGGGCTCA TATTTAACTG GAAGCAGGAC TACGTTGATG
901CCCCATTGAG CATCCCCGAC TTCCTGACTC ACTCTCTGAA CATTGACTGG AGCCAGTATC
961AGTGTTGGGA TCTGGTGCAA CAAACACAAA ACTACCTGAA GCTGCTGCTT TCCTTAGTTA
1021ACAGTGATGA TGACAGCGGG CTGCTGGTAC ACTGTATCTC AGGCTGGGAT CGGACCCCCC
1081TCTTCATCTC CCTCCTGCGC CTTTCCTTGT GGGCTGATGG GCTCATCCAC ACGTCCCTGA
1141AGCCCACTGA GATCCTCTAC CTCACTGTGG CCTATGACTG GTTCCTCTTC GGGCACATGT
1201TGGTAGATCG GCTCAGCAAA GGGGAGGAGA TTTTCTTCTT CTGCTTCAAT TTTTTGAAGC
1261ATATTACCTC CGAGGAGTTC TCTGCTCTGA AGACCCAGAG GAGGAAGAGT TTGCCAGCCC
1321GGGATGGAGG CTTCACCCTG GAAGACATCT GCATGCTGAG ACGAAAGGAC CGTGGCAGCA
1381CCACCAGCCT TGGCAGCGAC TTCTCCCTGG TCATGGAGAG TTCCCCAGGA GCCACTGGGA
1441GCTTCACCTA TGAGGCCGTG GAGCTGGTCC CAGCAGGAGC GCCAACTCAG GCAGCTTGGA
1501GGAAGAGCCA CTCATCCTCT CCACAGAGTG TCCTCTGGAA CCGGCCACAA CCCTCAGAGG
1561ACCGCTTGCC TTCCCAGCAG GGGCTGGCGG AAGCCAGGTC TTCCAGCTCC TCTTCCTCAA
1621ACCATTCTGA TAACTTTTTC AGGATGGGTA GCAGTCCCCT GGAGGTCCCC AAACCCAGAT
1681CAGTGGACCA TCCCCTGCCC GGATCCTCTC TCTCCACAGA CTATGGCAGC TGGCAGATGG
1741TAACGGGCTG TGGCAGTATT CAGGAGCGGG CTGTCCTGCA CACAGACTCC TCTCTCCCTT
1801TCAGCTTCCC GGATGAGCTC CCTAACAGTT GTCTGCTTGC AGCCCTGAGT GATCGAGAGA
1861CTCGGCTGCA GGAGGTGCGC TCAGCCTTCT TGGCTGCGTA CAGCAGCACA GTGGGGCTTC
1921GGGCAGTAGC CCCCAGTCCT TCCGGTGCCA TCGGGGGCCT GCTGGAGCAA TTTGCCCGTG
1981GTGTTGGACT CCGGAGCATC AGCAGCAATG CCTTGTGCCC AACTTTCTTG TACAAAGTtg
2041gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)