Construct: ORF ccsbBroadEn_04568

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010884.1_s300c1, BRDN0000393917
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GGTLC1 (92086)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 92086 GGTLC1 gamma-glutamyltransferase l... NM_178311.3 100% 100%
2 human 92086 GGTLC1 gamma-glutamyltransferase l... NM_178312.3 100% 100%
3 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_005260865.4 100% 100%
4 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_017028126.2 100% 100%
5 human 728226 GGTLC3 gamma-glutamyltransferase l... NM_001355479.1 95.5% 89.3% (many diffs)
6 human 728441 GGT2 gamma-glutamyltransferase 2 XM_011530621.2 95.5% 88.8% (many diffs)
7 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029185.1 95.5% 88.8% (many diffs)
8 human 91227 GGTLC2 gamma-glutamyltransferase l... NM_199127.2 90.7% 87.1% (many diffs)
9 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_024452301.1 90.7% 87.1% (many diffs)
10 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_005260863.4 89.2% 89.2% 417_497del
11 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_005260864.4 89.2% 89.2% 417_497del
12 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_011529391.3 89.2% 89.2% 417_497del
13 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_011529392.2 86.6% 86.6% 0_1ins90
14 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_011529393.2 86.6% 86.6% 0_1ins90
15 human 91227 GGTLC2 gamma-glutamyltransferase l... NM_001282879.1 85.7% 84.1% (many diffs)
16 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_005261817.3 85.7% 84.1% (many diffs)
17 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_011530497.1 85.7% 84.1% (many diffs)
18 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724929.2 85.4% 79.7% (many diffs)
19 human 728226 GGTLC3 gamma-glutamyltransferase l... XM_024452264.1 85.3% 79.7% (many diffs)
20 human 728441 GGT2 gamma-glutamyltransferase 2 XM_006724396.2 85.3% 79.3% (many diffs)
21 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029184.1 85.3% 79.3% (many diffs)
22 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_005261818.2 82.3% 79% (many diffs)
23 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_005261815.3 78.5% 77% (many diffs)
24 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724928.3 67.1% 62.6% (many diffs)
25 human 728441 GGT2 gamma-glutamyltransferase 2 XM_005261890.4 67% 62.3% (many diffs)
26 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029183.1 67% 62.3% (many diffs)
27 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030145.2 58% 54.1% (many diffs)
28 human 728441 GGT2 gamma-glutamyltransferase 2 XM_006724395.4 53.3% 49.6% (many diffs)
29 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029182.2 52.2% 48.5% (many diffs)
30 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724924.4 49% 45.7% (many diffs)
31 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030144.1 49% 45.7% (many diffs)
32 human 728441 GGT2 gamma-glutamyltransferase 2 XM_006724392.3 49% 45.5% (many diffs)
33 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029179.2 49% 45.5% (many diffs)
34 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029180.1 49% 45.5% (many diffs)
35 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029181.2 49% 45.5% (many diffs)
36 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030143.2 43.9% 41% (many diffs)
37 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724921.4 41.6% 38.8% (many diffs)
38 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030136.2 41.6% 38.8% (many diffs)
39 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030137.2 41.6% 38.8% (many diffs)
40 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030140.2 41.6% 38.8% (many diffs)
41 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030141.2 41.6% 38.8% (many diffs)
42 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030142.2 41.6% 38.8% (many diffs)
43 human 2678 GGT1 gamma-glutamyltransferase 1 NM_001288833.2 38.4% 37.9% (many diffs)
44 human 2678 GGT1 gamma-glutamyltransferase 1 NM_013421.3 38.4% 37.9% (many diffs)
45 human 2678 GGT1 gamma-glutamyltransferase 1 NM_013430.2 38.4% 37.9% (many diffs)
46 human 102724197 LOC102724197 inactive glutathione hydrol... XM_011546256.3 37.8% 35.3% (many diffs)
47 human 728441 GGT2 gamma-glutamyltransferase 2 NM_001351304.1 37.4% 34.8% (many diffs)
48 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029186.2 37.4% 34.8% (many diffs)
49 human 2679 GGT3P gamma-glutamyltransferase 3... NR_003267.1 31.7% (many diffs)
50 human 102724823 LOC102724823 inactive glutathione hydrol... XR_002958856.1 17.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
741
ORF length:
675
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC CTCCGAGTTC TTCTCTGCCC AGCTCCGGGC CCAGATCTCT GACGACACCA
121CTCACCCGAT CTCCTACTAC AAGCCCGAGT TCTACATGCC GGATGACGGG GGCACTGCTC
181ACCTGTCTGT GGTCGCAGAG GACGGCAGTG CTGTGTCCGC CACCAGCACC ATCAACCTCT
241ACTTTGGCTC CAAGGTGCGC TCCCCAGTCA GCGGGATCCT GCTCAATAAT GAAATGGATG
301ACTTCAGCTC TACCAGCATC ACCAACGAGT TTGGGGTACC CCCCTCACCT GCCAATTTCA
361TCCAGCCAGG GAAGCAGCCG CTCTCGTCCA TGTGCCCGAC GATCATGGTG GGCCAGGACG
421GCCAGGTCCG GATGGTGGTG GGAGCTGCCG GGGGCACGCA GATCACCATG GCCACTGCAC
481TGGCCATCAT CTACAACCTC TGGTTCGGCT ATGACGTGAA GTGGGCCGTG GAGGAGCCCC
541GGCTGCACAA CCAGCTTCTG CCCAACGTCA CGACAGTGGA GAGAAACATT GACCAGGAAG
601TGACTGCAGC CCTGGAGACC CGGCACCATC ACACCCAGAT CACGTCCACC TTCATTGCTG
661TGGTGCAAGC CATCGTCCGC ATGGCTGGTG GCTGGGCAGC TGCCTCGGAC TCCAGGAAAG
721GTGGGGAACC TGCTGGCTAC TGCCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
781attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)