Construct: ORF ccsbBroadEn_06235

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001068.1_s300c1, BRDN0000389065
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
G6PD (2539)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2539 G6PD glucose-6-phosphate dehydro... NM_001042351.3 100% 100%
2 human 2539 G6PD glucose-6-phosphate dehydro... NM_001360016.2 100% 100%
3 human 2539 G6PD glucose-6-phosphate dehydro... NM_000402.4 94.4% 94.4% 1_90del
4 mouse 14381 G6pdx glucose-6-phosphate dehydro... NM_008062.2 87.5% 93.7% (many diffs)
5 mouse 14380 G6pd2 glucose-6-phosphate dehydro... NM_019468.2 84.7% 86.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1611
ORF length:
1545
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC AGAGCAGGTG GCCCTGAGCC GGACCCAGGT GTGCGGGATC CTGCGGGAAG
121AGCTTTTCCA GGGCGATGCC TTCCATCAGT CGGATACACA CATATTCATC ATCATGGGTG
181CATCGGGTGA CCTGGCCAAG AAGAAGATCT ACCCCACCAT CTGGTGGCTG TTCCGGGATG
241GCCTTCTGCC CGAAAACACC TTCATCGTGG GCTATGCCCG TTCCCGCCTC ACAGTGGCTG
301ACATCCGCAA ACAGAGTGAG CCCTTCTTCA AGGCCACCCC AGAGGAGAAG CTCAAGCTGG
361AGGACTTCTT TGCCCGCAAC TCCTATGTGG CTGGCCAGTA CGATGATGCA GCCTCCTACC
421AGCGCCTCAA CAGCCACATG AATGCCCTCC ACCTGGGGTC ACAGGCCAAC CGCCTCTTCT
481ACCTGGCCTT GCCCCCGACC GTCTACGAGG CCGTCACCAA GAACATTCAC GAGTCCTGCA
541TGAGCCAGAT AGGCTGGAAC CGCATCATCG TGGAGAAGCC CTTCGGGAGG GACCTGCAGA
601GCTCTGACCG GCTGTCCAAC CACATCTCCT CCCTGTTCCG TGAGGACCAG ATCTACCGCA
661TCGACCACTA CCTGGGCAAG GAGATGGTGC AGAACCTCAT GGTGCTGAGA TTTGCCAACA
721GGATCTTCGG CCCCATCTGG AACCGGGACA ACATCGCCTG CGTTATCCTC ACCTTCAAGG
781AGCCCTTTGG CACTGAGGGT CGCGGGGGCT ATTTCGATGA ATTTGGGATC ATCCGGGACG
841TGATGCAGAA CCACCTACTG CAGATGCTGT GTCTGGTGGC CATGGAGAAG CCCGCCTCCA
901CCAACTCAGA TGACGTCCGT GATGAGAAGG TCAAGGTGTT GAAATGCATC TCAGAGGTGC
961AGGCCAACAA TGTGGTCCTG GGCCAGTACG TGGGGAACCC CGATGGAGAG GGCGAGGCCA
1021CCAAAGGGTA CCTGGACGAC CCCACGGTGC CCCGCGGGTC CACCACCGCC ACTTTTGCAG
1081CCGTCGTCCT CTATGTGGAG AATGAGAGGT GGGATGGGGT GCCCTTCATC CTGCGCTGCG
1141GCAAGGCCCT GAACGAGCGC AAGGCCGAGG TGAGGCTGCA GTTCCATGAT GTGGCCGGCG
1201ACATCTTCCA CCAGCAGTGC AAGCGCAACG AGCTGGTGAT CCGCGTGCAG CCCAACGAGG
1261CCGTGTACAC CAAGATGATG ACCAAGAAGC CGGGCATGTT CTTCAACCCC GAGGAGTCGG
1321AGCTGGACCT GACCTACGGC AACAGATACA AGAACGTGAA GCTCCCTGAC GCCTATGAGC
1381GCCTCATCCT GGACGTCTTC TGCGGGAGCC AGATGCACTT CGTGCGCAGC GACGAGCTCC
1441GTGAGGCCTG GCGTATTTTC ACCCCACTGC TGCACCAGAT TGAGCTGGAG AAGCCCAAGC
1501CCATCCCCTA TATTTATGGC AGCCGAGGCC CCACGGAGGC AGACGAGCTG ATGAAGAGAG
1561TGGGTTTCCA GTATGAGGGC ACCTACAAGT GGGTGAACCC CCACAAGCTC TGCCCAACTT
1621TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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