Construct: ORF ccsbBroadEn_06322

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007297.1_s300c1, BRDN0000396642
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GRK6 (2870)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2870 GRK6 G protein-coupled receptor ... NM_002082.3 99.8% 99.8% 1120C>T;1392G>C;1566A>G
2 human 2870 GRK6 G protein-coupled receptor ... NM_001004106.3 97.6% 95.4% (many diffs)
3 human 2870 GRK6 G protein-coupled receptor ... NM_001004105.3 94.9% 94.9% (many diffs)
4 human 2870 GRK6 G protein-coupled receptor ... XM_006714859.2 94.3% 94.3% (many diffs)
5 human 2870 GRK6 G protein-coupled receptor ... XM_006714858.3 93.4% 91.2% (many diffs)
6 human 2870 GRK6 G protein-coupled receptor ... XM_011534537.2 91.5% 82.2% (many diffs)
7 human 2870 GRK6 G protein-coupled receptor ... XM_024446032.1 64.1% 64.1% (many diffs)
8 human 2870 GRK6 G protein-coupled receptor ... NM_001364164.2 61.9% 59.7% (many diffs)
9 human 2870 GRK6 G protein-coupled receptor ... XM_011534538.1 54.8% 54.8% (many diffs)
10 human 2871 GRK6P1 G protein-coupled receptor ... NR_144554.1 53.3% (many diffs)
11 mouse 26385 Grk6 G protein-coupled receptor ... NM_001038018.4 89.5% 95.7% (many diffs)
12 mouse 26385 Grk6 G protein-coupled receptor ... NM_001286064.1 88.7% 94.9% (many diffs)
13 mouse 26385 Grk6 G protein-coupled receptor ... NM_001112711.2 87.4% 92.1% (many diffs)
14 mouse 26385 Grk6 G protein-coupled receptor ... XM_006517251.3 87.4% 92.8% (many diffs)
15 mouse 26385 Grk6 G protein-coupled receptor ... NM_011938.4 84.8% 91.6% (many diffs)
16 mouse 26385 Grk6 G protein-coupled receptor ... NM_001286063.1 84.3% 90.3% (many diffs)
17 mouse 26385 Grk6 G protein-coupled receptor ... NM_001286065.1 82.1% 86.4% (many diffs)
18 mouse 26385 Grk6 G protein-coupled receptor ... XM_006517252.1 49% 52.2% (many diffs)
19 mouse 26385 Grk6 G protein-coupled receptor ... NM_001286066.1 44.4% 48.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1833
ORF length:
1767
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA GCTCGAGAAC ATCGTAGCGA ACACGGTGCT ACTCAAGGCC CGGGAAGGTG
121GCGGTGGAAA TCGCAAAGGC AAAAGCAAGA AATGGCGGCA GATGCTCCAG TTCCCTCACA
181TCAGCCAGTG CGAAGAGCTG CGGCTCAGCC TCGAGCGTGA CTATCACAGC CTGTGCGAGC
241GGCAGCCCAT TGGGCGCCTG CTGTTCCGAG AGTTCTGTGC CACGAGGCCG GAGCTGAGCC
301GCTGCGTCGC CTTCCTGGAT GGGGTGGCCG AGTATGAAGT GACCCCGGAT GACAAGCGGA
361AGGCATGTGG GCGGCAGCTA ACGCAGAATT TTCTGAGCCA CACGGGTCCT GACCTCATCC
421CTGAGGTCCC CCGGCAGCTG GTGACGAACT GCACCCAGCG GCTGGAGCAG GGTCCCTGCA
481AAGACCTTTT CCAGGAACTC ACCCGGCTGA CCCACGAGTA CCTGAGCGTG GCCCCTTTTG
541CCGACTACCT CGACAGCATC TACTTCAACC GTTTCCTGCA GTGGAAGTGG CTGGAAAGGC
601AGCCAGTGAC CAAAAACACC TTCAGGCAAT ACCGAGTCCT GGGCAAAGGT GGCTTTGGGG
661AGGTGTGCGC CTGCCAGGTG CGGGCCACAG GTAAGATGTA TGCCTGCAAG AAGCTAGAGA
721AAAAGCGGAT CAAGAAGCGG AAAGGGGAGG CCATGGCGCT GAACGAGAAG CAGATCCTGG
781AGAAAGTGAA CAGTAGGTTT GTAGTGAGCT TGGCCTACGC CTATGAGACC AAGGACGCGC
841TGTGCCTGGT GCTGACACTG ATGAACGGGG GCGACCTCAA GTTCCACATC TACCACATGG
901GCCAGGCTGG CTTCCCCGAA GCGCGGGCCG TCTTCTACGC CGCCGAGATC TGCTGTGGCC
961TGGAGGACCT GCACCGGGAG CGCATCGTGT ACAGGGACCT GAAGCCCGAG AACATCTTGC
1021TGGATGACCA CGGCCACATC CGCATCTCTG ACCTGGGACT AGCTGTGCAT GTGCCCGAGG
1081GCCAGACCAT CAAAGGGCGT GTGGGCACCG TGGGTTACAT GGCTCCGGAG GTGGTGAAGA
1141ATGAACGGTA CACGTTCAGC CCTGACTGGT GGGCGCTCGG CTGCTTCCTG TACGAGATGA
1201TCGCAGGCCA GTCGCCCTTC CAGCAGAGGA AGAAGAAGAT CAAGCGGGAG GAGGTGGAGC
1261GGCTGGTGAA GGAGGTCCCC GAGGAGTATT CCGAGCGCTT TTCCCCGCAG GCCCGCTCAC
1321TTTGCTCACA GCTCCTCTGC AAGGACCCTG CCGAACGCCT GGGGTGTCGT GGGGGCAGTG
1381CCCGCGAGGT GAAGGAGCAC CCCCTCTTTA AGAAGCTGAA CTTCAAGCGG CTGGGAGCTG
1441GCATGCTGGA GCCGCCCTTC AAGCCTGACC CCCAGGCCAT TTACTGCAAG GATGTTCTGG
1501ACATTGAACA GTTCTCTACG GTCAAGGGCG TGGAGCTGGA GCCTACCGAC CAGGACTTCT
1561ACCAGAAGTT TGCCACAGGC AGTGTGCCCA TCCCCTGGCA GAACGAGATG GTGGAGACCG
1621AGTGCTTCCA GGAGCTGAAT GTCTTTGGGC TGGATGGCTC AGTTCCCCCA GACCTGGACT
1681GGAAGGGCCA GCCACCTGCA CCTCCTAAAA AGGGACTGCT GCAGAGACTC TTCAGTCGCC
1741AAAGGATTGC TGTGGAAACT GCAGCGACAG CGAGGAAGAG CTCCCCACCC GCCTCTAGCC
1801CCCAGCCCGA GGCCCCCACC AGCAGTTGGC GGTACCCAAC TTTCTTGTAC AAAGTtggca
1861ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)