Construct: ORF ccsbBroadEn_10303

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018529.1_s300c1, BRDN0000398525
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD30BP2 (149992)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 554226 ANKRD30BL ankyrin repeat domain 30B like NM_001358416.1 24.2% 5.3% (many diffs)
2 human 554226 ANKRD30BL ankyrin repeat domain 30B like NR_164000.1 13.8% (many diffs)
3 human 554226 ANKRD30BL ankyrin repeat domain 30B like NR_027020.3 13.4% (many diffs)
4 human 374860 ANKRD30B ankyrin repeat domain 30B XM_024451168.1 13.4% 3.6% (many diffs)
5 human 374860 ANKRD30B ankyrin repeat domain 30B XM_024451167.1 13% 3.6% (many diffs)
6 human 554226 ANKRD30BL ankyrin repeat domain 30B like NR_163999.1 12.4% (many diffs)
7 human 554226 ANKRD30BL ankyrin repeat domain 30B like NR_027019.2 11.6% (many diffs)
8 human 644669 LOC644669 ankyrin repeat domain 30B p... NR_027417.1 9.4% (many diffs)
9 human 554226 ANKRD30BL ankyrin repeat domain 30B like NR_152415.2 8% (many diffs)
10 human 374860 ANKRD30B ankyrin repeat domain 30B XM_011525666.2 6.5% 1.1% (many diffs)
11 human 149992 ANKRD30BP2 ankyrin repeat domain 30B p... NR_026916.1 5.9% 1_622del;827_3438del
12 human 374860 ANKRD30B ankyrin repeat domain 30B XM_011525665.2 5.1% 1.4% (many diffs)
13 human 91074 ANKRD30A ankyrin repeat domain 30A XM_011519758.2 4.9% 1.1% (many diffs)
14 human 374860 ANKRD30B ankyrin repeat domain 30B XM_011525664.2 4.8% 1.3% (many diffs)
15 human 374860 ANKRD30B ankyrin repeat domain 30B NR_160272.1 4.6% (many diffs)
16 human 91074 ANKRD30A ankyrin repeat domain 30A NM_052997.2 4.4% 1.2% (many diffs)
17 human 374860 ANKRD30B ankyrin repeat domain 30B XR_935062.2 3.9% (many diffs)
18 human 91074 ANKRD30A ankyrin repeat domain 30A XM_011519757.3 3.7% 1% (many diffs)
19 human 374860 ANKRD30B ankyrin repeat domain 30B XR_935061.2 3.6% (many diffs)
20 human 374860 ANKRD30B ankyrin repeat domain 30B NM_001367607.1 3.6% 1% (many diffs)
21 human 91074 ANKRD30A ankyrin repeat domain 30A XR_001747257.1 3.6% (many diffs)
22 human 374860 ANKRD30B ankyrin repeat domain 30B XR_935060.2 3.6% (many diffs)
23 human 374860 ANKRD30B ankyrin repeat domain 30B XR_935059.2 3.5% (many diffs)
24 human 374860 ANKRD30B ankyrin repeat domain 30B XR_001753189.1 3.5% (many diffs)
25 human 374860 ANKRD30B ankyrin repeat domain 30B XR_001753190.1 3.5% (many diffs)
26 human 374860 ANKRD30B ankyrin repeat domain 30B XR_935058.2 3.5% (many diffs)
27 human 374860 ANKRD30B ankyrin repeat domain 30B XR_935057.2 3.4% (many diffs)
28 human 554226 ANKRD30BL ankyrin repeat domain 30B like XR_002959312.1 3.2% (many diffs)
29 human 91074 ANKRD30A ankyrin repeat domain 30A XR_930524.3 2.1% (many diffs)
30 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957044.1 2.1% (many diffs)
31 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957048.1 1.8% (many diffs)
32 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957046.1 1.8% (many diffs)
33 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957047.1 1.8% (many diffs)
34 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957043.1 1.7% (many diffs)
35 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957041.1 1.7% (many diffs)
36 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957040.1 1.7% (many diffs)
37 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957042.1 1.7% (many diffs)
38 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957045.1 1.7% (many diffs)
39 human 91074 ANKRD30A ankyrin repeat domain 30A XR_002957039.1 1.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
273
ORF length:
204
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCAAATGCAA ATGGAGTTGA TAAGTTTAAA TGCATTCATC AACAACTTTT
121GGAATATAAA CAAAAGATAT CTAAAAATTC TCAAAATAGT AATCCAGAAG GAACATCTGA
181AGGAACACCT GACGAGGCTG CACCCTTGGC GGAAAGAACA CCTGACACGG CTGAAAGCTT
241GGTGGAAAGA ACACCTGACG AATAGGATAC AGTTGCCAAC TTTCTTGTAC AAAGTtggca
301ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)

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