Construct: ORF ccsbBroadEn_12622

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015098.1_s300c1, BRDN0000396026
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GSTCD (79807)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79807 GSTCD glutathione S-transferase C... NM_001031720.3 99.8% 99.8% 989_991delCAG
2 human 79807 GSTCD glutathione S-transferase C... NM_001370181.1 99.8% 99.8% 989_991delCAG
3 human 79807 GSTCD glutathione S-transferase C... XM_011532248.3 99.8% 99.8% 989_991delCAG
4 human 79807 GSTCD glutathione S-transferase C... XM_011532249.3 99.8% 99.8% 989_991delCAG
5 human 79807 GSTCD glutathione S-transferase C... XM_011532252.3 99.8% 99.8% 989_991delCAG
6 human 79807 GSTCD glutathione S-transferase C... NM_024751.3 86% 86% 165_166ins261;728_730delCAG
7 human 79807 GSTCD glutathione S-transferase C... XR_938771.1 71.3% (many diffs)
8 mouse 67553 Gstcd glutathione S-transferase, ... NM_026231.2 84% 83.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1962
ORF length:
1896
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA AGCCATAAAG AAAAGTCTTA CAGAAGAAGA ATACCTGTAC CTGGACTTTT
121CTCACCAAAC AGAAGGATGC ATCTTTCCTC TTCATACATC TGTAACTTTA TTTCTGTTAT
181CTTACTGTGA CTGTAAAATC TTTAAAATTT GCTTAGTTGT CACCAAAGAG GTGAGTAGAG
241ATAGTTCACT ACTAAGAGAT GACCTGATCC AGGATGTTGA AATACAGATT ATTTCAAGGC
301AGGAGCTCCC ACCAATAGTC CAAAATTGCT GTTTGCCTGC AGTAGTAGAA CGATCAGACA
361ATTTTTGTAG AGCAGGACTT GCTGTTGTAT TGAGACACAT AATCCAGAAA TCCTATGAAG
421CAGACCCCTT AAAGAAGGAA CTTTTGGAAC TTCTGGGCTT TAAAAAGACT TGCTTGAAAG
481CCTGTGCTGA AGTTAGTCAG TGGACCAGGC TATGTGAACT CACCATCCCT TTGGCTATTG
541AGAATTTTCT CAGAGAATCT TCTGACCAGC CCCCAACTAT ACCTGTAGAA ATACTACAGC
601TAGAGAAAAA GCTTAGTGAG CCTGTTAGAG TGCATAATGA TGATAAACTC CGCAGGCAGA
661AGCTCAAGCA ACAGAAGGCT GATGGAGTTG GGCCTCCCCT TACTAAGGGA AAGGCAAAGA
721GCAAGGTCCA CACACAGGAA ACATCTGAAG GGTTGGATTC TTCATCCAAG AGTCTGGAAC
781TGAAAGTGGC ATTCTCAAAG CTCACAGTAC AGGAAGAACC AGCTACTACC AACAGAGAGC
841CTTCTCACAT CAGAAAAGCA AAAGCCTCCG ACCTTCCACC TCTGGAGCAT GTGTTTGCAG
901AAGGGCTTTA CTTCACTCTG GCAGATATTG TGCTCTTGCC CTGTATCCAT CATTTCTTGG
961TAATTATCAG CAGGAAATTT TCTGAGAAGC TGGTAGAATT TCCATTGCTA GCCTCTTGGT
1021ACCAGAGGAT TCAGGAAGTG CCAGGAGTAA AAACAGCTTC TAAGTGTGGG ATCCAATTTC
1081TCCATTTACC AAAGTTGTTG ACAACCTCAA CTGAACAGCA TCCAAACTTA TGTGAAGTCC
1141CAGGTGTAGA AGAGCAAAGC GATCCTTTAT TTATAGGAGG ACCAAGACCA ACCATGGCCA
1201AGTTAATGGA AAAGGGCATT GAAGTGATGT TTTCTCCCCA CCCTTGCCCT ACTTGGACTC
1261TTGATTGGAA TGTTCTCCCT GCAGCAGTCA GCCCAAAGGA AGGTAAAATG TCCAGTGATC
1321GAGCTTTGAG GAAGCAGCAA CAGTTGAACA ACCTTGTCTA TGTGGTAACA AATCAGGCCA
1381AACCTGGTGA CAGAATTGTG GATTTCTGCA GCGGTGGGGG CCATGTTGGA ATTGTCCTTG
1441CTCACATGCT GCCATCATGT CAGGTTACAT TAATAGAAAA CAAGGAATTA TCATTAATTC
1501GTGCTAAGAA GAGAAGTGAT GAACTGGGTT TAAGCAACAT TTGGTTCATT CAAGCAAATA
1561TGGAATATTT TACTGGGATG TTTAATATTG GAGTAGCATT GCATGCTTGT GGAGTGGCAA
1621CAGACATGGT GATTGAGCAC TGTATCAAAA CACGGGCTTC CTTCGTCACA TGCCCTTGCT
1681GTTATGGTTT CATTCAGAAC ACCTCAAAGT TCAATTTTCC AAAAAGTGAA CAATTCAAGA
1741AAACTTTATC ATACAAGGAA CACATGATTC TGTGCAGATT TGCAGACCAG ACAGCTGTCC
1801AGCTCCCACC CCAACGAAGG CTCATAGGAA AACAGTGCAT GTGCTTGGTG GATCTGGATC
1861GAGCAAGAGC TGCAGAAGAA TGTGGATACT CCGTTCAAGT GATATCCATG GAGCCAGAGA
1921GCTGCTCTCC CAAAAATAAC ATGATTGTGG GAGTCCCCAT TTACCCAACT TTCTTGTACA
1981AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)