Construct: ORF ccsbBroadEn_14636

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019035.1_s300c1, BRDN0000458653
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FER (2241)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2241 FER FER tyrosine kinase NM_005246.4 100% 100%
2 human 2241 FER FER tyrosine kinase XM_011543271.3 100% 100%
3 human 2241 FER FER tyrosine kinase XM_017009230.2 100% 100%
4 human 2241 FER FER tyrosine kinase XM_017009231.2 100% 100%
5 human 2241 FER FER tyrosine kinase XM_011543266.2 98.2% 98.2% 2048_2092del
6 human 2241 FER FER tyrosine kinase XM_011543267.2 98.2% 98.2% 2048_2092del
7 human 2241 FER FER tyrosine kinase XM_011543269.2 98.2% 98.2% 2048_2092del
8 human 2241 FER FER tyrosine kinase XM_011543270.3 98.2% 98.2% 2048_2092del
9 human 2241 FER FER tyrosine kinase XM_017009229.2 98.2% 98.2% 2048_2092del
10 human 2241 FER FER tyrosine kinase XM_017009232.2 90.5% 90.3% (many diffs)
11 human 2241 FER FER tyrosine kinase XM_011543272.2 90% 90% 1329_1330ins204;1844_1888del
12 human 2241 FER FER tyrosine kinase XM_017009233.2 89.4% 89.4% 0_1ins219;1829_1873del
13 human 2241 FER FER tyrosine kinase NM_001308028.2 78.7% 78.7% 0_1ins525
14 human 2241 FER FER tyrosine kinase XR_948244.2 78.2% (many diffs)
15 human 2241 FER FER tyrosine kinase XM_017009234.1 67.9% 67% (many diffs)
16 human 2241 FER FER tyrosine kinase XM_017009235.1 62.8% 60.7% 1468_1469ins65;1551_1552ins850
17 human 2241 FER FER tyrosine kinase XR_001742041.1 62.5% 1_237del;1705_1706ins65;1929_1930ins709
18 human 2241 FER FER tyrosine kinase XR_002956153.1 55.6% 1_237del;1473_1642del;2007_2008ins866
19 human 2241 FER FER tyrosine kinase NM_001308031.1 53.2% 50.7% (many diffs)
20 human 2241 FER FER tyrosine kinase XM_011543276.2 52.2% 49.8% (many diffs)
21 human 2241 FER FER tyrosine kinase XM_011543278.1 50.9% 50.3% (many diffs)
22 human 2241 FER FER tyrosine kinase NR_146155.2 20.5% 1_105del;1341_1510del;2742_12010del
23 human 2241 FER FER tyrosine kinase NM_001308038.2 19.7% 19.5% 482T>G;486_487insGAAACTGAA;489_490ins1968
24 mouse 14158 Fer fer (fms/fps related) prote... XM_006523643.4 88.3% 93% (many diffs)
25 mouse 14158 Fer fer (fms/fps related) prote... XM_011246293.3 88.3% 93% (many diffs)
26 mouse 14158 Fer fer (fms/fps related) prote... XM_030249496.1 88.3% 93% (many diffs)
27 mouse 14158 Fer fer (fms/fps related) prote... NM_001037997.3 88.2% 92.9% (many diffs)
28 mouse 14158 Fer fer (fms/fps related) prote... XM_006523640.4 88.2% 92.9% (many diffs)
29 mouse 14158 Fer fer (fms/fps related) prote... XM_006523641.4 88.2% 92.9% (many diffs)
30 mouse 14158 Fer fer (fms/fps related) prote... NM_001286415.1 81.7% 86.1% (many diffs)
31 mouse 14158 Fer fer (fms/fps related) prote... XM_006523645.4 80.2% 84.4% (many diffs)
32 mouse 14158 Fer fer (fms/fps related) prote... XM_017317242.2 80.2% 84.4% (many diffs)
33 mouse 14158 Fer fer (fms/fps related) prote... XR_003952087.1 69% (many diffs)
34 mouse 14158 Fer fer (fms/fps related) prote... XR_003952086.1 68.3% (many diffs)
35 mouse 14158 Fer fer (fms/fps related) prote... XR_003952084.1 68.2% (many diffs)
36 mouse 14158 Fer fer (fms/fps related) prote... XR_003952085.1 65.2% (many diffs)
37 mouse 14158 Fer fer (fms/fps related) prote... XR_385280.4 65.2% (many diffs)
38 mouse 14158 Fer fer (fms/fps related) prote... NM_008000.2 47% 45.5% (many diffs)
39 mouse 14158 Fer fer (fms/fps related) prote... XM_006523647.4 47% 45.5% (many diffs)
40 mouse 14158 Fer fer (fms/fps related) prote... XM_017317243.1 47% 45.5% (many diffs)
41 mouse 14158 Fer fer (fms/fps related) prote... XR_385281.4 46.6% (many diffs)
42 mouse 14158 Fer fer (fms/fps related) prote... XM_006523650.4 45.9% 47.9% (many diffs)
43 mouse 14158 Fer fer (fms/fps related) prote... XM_017317244.1 45.2% 44.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2535
ORF length:
2466
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcaccat ggggtttggg agtgacctga agaattcaca tgaagcagtg ttaaaattgc
121aagactggga attacggtta ctggaaacag taaagaaatt tatggccctg agaataaaaa
181gtgataaaga atatgcatct actttacaga acctttgtaa tcaagttgat aaggaaagta
241ctgtccaaat gaattatgtc agcaacgtat ccaagtcttg gctacttatg attcagcaga
301cagaacaact tagtaggata atgaagacac atgcagagga cttgaactct ggacctttac
361acaggctcac catgatgatt aaggacaagc agcaggtgaa gaaaagttac ataggtgttc
421atcagcagat agaggcagag atgatcaagg ttaccaaaac agaattggag aagttaaaat
481gcagctatag acaattaata aaagaaatga attctgccaa agagaaatat aaagaagctt
541tagctaaagg gaaggaaact gaaaaggcca aggaacgata cgacaaagcc acaatgaaac
601ttcatatgtt gcacaatcag tatgtattgg cgttgaaagg ggcacagctc catcagaatc
661agtattatga tatcacactt cccctgcttc tggactcctt acaaaagatg caagaagaaa
721tgataaaagc actcaaaggt atatttgatg aatacagcca gataaccagt cttgtcacag
781aggaaatagt gaatgtccat aaagagattc aaatgtcggt tgaacagata gatcctagta
841cagaatacaa taatttcata gatgttcaca gaacaacggc tgctaaagaa caagaaatag
901agtttgatac ttccttactg gaagaaaatg aaaatcttca ggcaaatgag atcatgtgga
961ataacttaac agcagaaagt ttgcaagtaa tgttgaaaac gttagcggaa gaacttatgc
1021aaacacagca gatgctttta aacaaggagg aggctgtttt ggagttagag aagagaattg
1081aagaatcttc tgaaacttgt gagaagaagt ctgatattgt gcttctgcta agccaaaaac
1141aggcacttga agaactgaaa cagtcagtcc agcagctgag atgcactgaa gcaaagtttt
1201cagcacagaa ggaattacta gagcaaaaag tgcaagaaaa tgatgggaaa gagccacctc
1261cagtagtaaa ttatgaagaa gatgcacgat cagttacatc tatggaaaga aaggagaggc
1321tatccaaatt tgaatctatt cgtcattcaa ttgctggaat aattaggtct ccaaaatctg
1381cactgggctc ttcagcactt tctgatatga tctccatcag tgagaagcct ttggcagaac
1441aggactggta ccatggtgca attcccagaa tagaagctca agaactgtta aaaaaacaag
1501gagacttttt ggtgcgagag agtcatggga aacctggtga atatgtcctt tctgtatatt
1561ctgatggaca gaggagacat tttatcatac aatatgttga taacatgtat cgattcgagg
1621gcactgggtt ttcaaacatt cctcaactta tagatcatca ctatacaaca aaacaggtca
1681tcactaagaa atcaggtgta gttctgctga atcctattcc taaggacaag aaatggattc
1741tcagtcatga agatgtcata ttgggagaat tactgggcaa gggaaatttt ggtgaagtat
1801ataagggcac attaaaggat aaaacttctg ttgctgttaa aacatgtaaa gaagatcttc
1861ctcaggaatt gaaaataaaa tttttacaag aagccaaaat tctcaagcaa tatgatcatc
1921ccaatattgt caaacttata ggagtttgca cacaaagaca gcctgtctac atcattatgg
1981aactggtttc aggaggtgat ttcctcacct ttctgagaag gaagaaggat gaactaaaac
2041tcaaacagtt agtgaaattt tcattagacg ctgctgctgg tatgttgtat ctcgagagta
2101aaaactgtat acacagggac cttgctgcaa gaaactgcct ggtaggtgaa aataatgttc
2161tgaaaatcag tgactttgga atgtctcgtc aagaggatgg tggagtgtat tcatcttctg
2221gcttaaagca gattcccatt aaatggacag caccggaagc tcttaattat gggagataca
2281gttcagagag tgacgtgtgg agctttggca tccttctctg ggagaccttc agcttagggg
2341tttgtccgta ccctggaatg acaaatcagc aagcaagaga gcaagtagaa agaggatacc
2401ggatgtcagc tccccagcac tgtccagagg atatttccaa aatcatgatg aagtgttggg
2461attataaacc tgaaaatcgc cctaagttca gtgaacttca gaaagagctc actatcatca
2521agagaaaact cacattgcca actttcttgt acaaagttgg cattataaga aagcattgct
2581tatcaatttg ttgcaacgaa c

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