Construct: ORF ccsbBroadEn_14931

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005577.1_s300c1, BRDN0000458493
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DYRK1B (9149)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9149 DYRK1B dual specificity tyrosine p... NM_004714.3 100% 100%
2 human 9149 DYRK1B dual specificity tyrosine p... XM_005259398.4 100% 100%
3 human 9149 DYRK1B dual specificity tyrosine p... NM_006484.2 95.5% 95.5% 1129_1130ins84
4 human 9149 DYRK1B dual specificity tyrosine p... NM_006483.3 93.6% 93.6% 1093_1094ins120
5 mouse 13549 Dyrk1b dual-specificity tyrosine-(... NM_001037957.3 92.6% 97.2% (many diffs)
6 mouse 13549 Dyrk1b dual-specificity tyrosine-(... NM_010092.2 86.3% 90.9% (many diffs)
7 mouse 13549 Dyrk1b dual-specificity tyrosine-(... NM_001271370.1 84.5% 88.8% (many diffs)
8 mouse 13549 Dyrk1b dual-specificity tyrosine-(... XM_006539526.3 80.5% 84.7% (many diffs)
9 mouse 13549 Dyrk1b dual-specificity tyrosine-(... XM_006539527.3 78.8% 83% (many diffs)
10 mouse 13549 Dyrk1b dual-specificity tyrosine-(... XM_006539528.3 41.7% 36.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1953
ORF length:
1887
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc cgtcccaccg ggccatggtc ccttctctgg cttcccaggg ccccaggagc
121acacgcaggt attgcctgat gtgcggctac tgcctcggag gctgcccctg gccttccggg
181atgcaacctc agccccgctg cgtaagctct ctgtggacct catcaagacc tacaagcaca
241tcaatgaggt atactatgcg aagaagaagc ggcgggccca gcaggcgcca ccccaggatt
301cgagcaacaa gaaggagaag aaggtcctga accatggtta tgatgacgac aaccatgact
361acatcgtgcg cagtggcgag cgctggctgg agcgctacga aattgactcg ctcattggca
421aaggctcctt tggccaggtg gtgaaagcct atgatcatca gacccaggag cttgtggcca
481tcaagatcat caagaacaaa aaggctttcc tgaaccaggc ccagattgag ctgcggctgc
541tggagctgat gaaccagcat gacacggaga tgaagtacta tatagtacac ctgaagcggc
601acttcatgtt ccggaaccac ctgtgcctgg tatttgagct gctgtcctac aacctgtacg
661acctcctgcg caacacccac ttccgcggcg tctcgctgaa cctgacccgg aagctggcgc
721agcagctctg cacggcactg ctctttctgg ccacgcctga gctcagcatc attcactgcg
781acctcaagcc cgaaaacatc ttgctgtgca accccaagcg cagcgccatc aagattgtgg
841acttcggcag ctcctgccag cttggccaga ggatctacca gtatatccag agccgcttct
901accgctcacc tgaggtgctc ctgggcacac cctacgacct ggccattgac atgtggtccc
961tgggctgcat ccttgtggag atgcacaccg gagagcccct cttcagtggc tccaatgagg
1021tcgaccagat gaaccgcatt gtggaggtgc tgggcatccc accggccgcc atgctggacc
1081aggcgcccaa ggctcgcaag tactttgaac ggctgcctgg gggtggctgg accctacgaa
1141ggacgaaaga actcaggaag gattaccagg gccccgggac acggcggctg caggaggtgc
1201tgggcgtgca gacgggcggg cccgggggcc ggcgggcggg ggagccgggc cacagccccg
1261ccgactacct ccgcttccag gacctggtgc tgcgcatgct ggagtatgag cccgccgccc
1321gcatcagccc cctgggggct ctgcagcacg gcttcttccg ccgcacggcc gacgaggcca
1381ccaacacggg cccggcaggc agcagtgcct ccacctcgcc cgcgcccctc gacacctgcc
1441cctcttccag caccgccagc tccatctcca gttctggagg ctccagtggc tcctccagtg
1501acaaccggac ctaccgctac agcaaccgat attgtggggg ccctgggccc cctatcacag
1561actgtgagat gaacagcccc caggtcccac cctcccagcc gctgcggccc tgggcagggg
1621gtgatgtgcc ccacaagaca catcaagccc ctgcctctgc ctcgtcactg cctgggaccg
1681gggcccagtt acccccccag ccccgatacc ttggtcgtcc cccatcacca acctcaccac
1741cacccccgga gctgatggat gtgagcctgg tgggcggccc tgctgactgc tccccacctc
1801acccagcgcc tgccccccag cacccggctg cctcagccct ccggactcgg atgactggag
1861gtcgtccacc cctcccgcct cctgatgacc ctgccactct ggggcctcac ctgggcctcc
1921gtggtgtacc ccagagcaca gcagccagct cgtgcccaac tttcttgtac aaagttggca
1981ttataagaaa gcattgctta tcaatttgtt gcaacgaac

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