Construct: ORF ccsbBroadEn_15247

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018925.1_s300c1, BRDN0000458221
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
LRGUK (136332)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 136332 LRGUK leucine rich repeats and gu... NM_144648.3 99.1% 27.7% (many diffs)
2 human 136332 LRGUK leucine rich repeats and gu... XM_024446661.1 94.3% 29% (many diffs)
3 human 136332 LRGUK leucine rich repeats and gu... XM_024446659.1 93.2% 28.2% (many diffs)
4 human 136332 LRGUK leucine rich repeats and gu... XM_024446660.1 93.2% 28.2% (many diffs)
5 human 136332 LRGUK leucine rich repeats and gu... XM_024446662.1 79.2% 34.2% (many diffs)
6 human 136332 LRGUK leucine rich repeats and gu... XR_002956408.1 76% (many diffs)
7 human 136332 LRGUK leucine rich repeats and gu... XR_002956409.1 74.7% (many diffs)
8 human 136332 LRGUK leucine rich repeats and gu... XM_024446663.1 74.1% 36.8% (many diffs)
9 human 136332 LRGUK leucine rich repeats and gu... XR_002956410.1 73.8% (many diffs)
10 human 136332 LRGUK leucine rich repeats and gu... NM_001365701.2 64.9% 20.2% (many diffs)
11 human 136332 LRGUK leucine rich repeats and gu... NM_001365700.2 64.8% 20.2% (many diffs)
12 human 136332 LRGUK leucine rich repeats and gu... XM_024446658.1 59.2% 19.8% (many diffs)
13 human 136332 LRGUK leucine rich repeats and gu... XM_017011749.1 50.3% 5.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
98
ORF end:
794
ORF length:
696
Sequence:
1CACGATTTTA TTTTGACTGA TAGTGACCTG TTCGTTGCAA CAAATTGATG AGCAATGCTT
61TTTTATAATG CCAACTTTGT ACAAAAAAGT TGGCACCATG GCGACCTCCG AGAGGGCTCT
121CCTGAGGACC AGAGCTGCCT CTCTCCTGAG AGGCTTGGGC AGATCCCGAA CTGGAGCCCG
181ATCGTTACAG TTTCGCGCAG AAAAAGAGCG TCAGCCTTGC TGGTCTTTTC CCATGGGGCA
241GAAGACGAAA GGCAGCTCTA ACATAGCCTC CTCCTACCTG CTCCAGCAGC TCATGCACCG
301CTATCAGGAG CTGGACTCGG ACGGAGATGA GGACCAGGGC GAGGGCGAGG CGGGATCCGA
361GGAGTCCTCA GAGTCCGAAA TGCTGAATTT GGAGGAGGAA TTTGATGGGG TCCTGAGAGA
421GGAGGCTGTG GCCAAAGCAC TCCATCACTT GGGGCGCTCA GGCTCTGGGA CTGAGCAAGT
481CTACCTCAAT CTAACTTTAT CAGGTTGTAA TTTAATTGAT GTTAGCATTC TCTGTGGATA
541TGTTCATCTA CAGAAGTTGG ATCTTTCAGC GAATAAAATT GAAGATTTAT CTTGTGTGAG
601TTGTATGCCT TATCTCCTAG AACTTAATGC TTCTCAAAAT AATTTGACTA CGTTCTTCAA
661TTTCAAGCCA CCCAAAAACC TCAAGAAAGC GGATTTTTCC CACAACCAAA TTTCTGAAAT
721TTGTGATTTG TCAGCGTATC ATGCTCTCAC TAAACTAATT TTGGATGGCA ATGAGATAGA
781AGAATCAGTG GACTAGAGAT GTGCACACCT AATTCACCTT AGTTTGGCCA CAATAGATCA
841CGACATTAAT GGCTTAAACA AGTTACCAAT CAAAATACTT TGTTCTGAGC AATAACCaga
901ttgagatgat cacaggtttg gaggatctga aagccctgca gaacctggat ctgtcccaca
961atcagataag cagcctccaa ggcttagaga atcatgacct cctggaagtg atcaacctgg
1021aggataataa gattgctgag ctgagagaaa tagaatacat taaaaattta cccatccttc
1081gagttctcaa tcttctagaa aatccaattc aggaaaagtc tgaatattgg ttcttcgtaa
1141tttttatgct tctgcgatta acagaattag atcagaagaa gattaaagtg gaagaaaagg
1201tttcagcagt gaataaatat gatcctcccc ctgaagtggt tgcagctcaa gaccacctga
1261cccatgttgt caacagcgtg atgcagccgc agaggatctt tgacagcact cttcccagcc
1321tggatgctcc ttatcccatg ctgatactag ctggtcctga agcttgtggg aaacgagagc
1381ttgcccatcg cctctgcaga cagtttagca cttacttcag atatggggcc tgtcatacca
1441caagaccacc ttactttgga gaaggggatc gagttgatta tcattttatc tctcaagacg
1501tttttgatga aatggtgaac atggggaaat tcattctaac atttagttat ggtaatcaca
1561agtatggatt aaatagggac accgtagaag gtatcgcaag agatggtttg gcaagctgta
1621ttcatatgga aatagaaggt gtaagaagtt tgaaatattc ctattttgag cctcgttata
1681tcctggtggt gcccatgaac aaggaaaaat atgagggata tttgcggaga aaaggattat
1741tcagtcgtgc agaaattgaa tttgctgtct ccagagtgga cctTTATAAT AAAAATTAAT
1801CAGAATTTTC CGGGGATATT TGAATGAGGT AATCAATGCA GATGATCTGG ATGTGCCTTA
1861CAAAAAACTG AGTCAGCTCA TTAGAGAATA CCTTGGATGG AATGAGGAAC CTGCCAAGAG
1921TTTGGCTACA ACTGCAGATG TAAAGACATC CCACCTGAAA CCTGAAGCGC ATCCTACAAA
1981GTATATTTCT TCGAATATGG GTGATTTCCT GCATTCTACA GACAGAAACT ACCTCATTAA
2041ATTTTGGGCC AAACTTTCAG CCAAAAAAAC ACCAGCGGAA AGAGATTCTA TACACAGACA
2101GCACGAGGCA GCCCGGCAAG CTCTAATGGG AAGGATACGC CCTGATCACA CACTCCTATT
2161TCAAAGGGGT CCAGTACCAG CACCTCTCAC CAGTGGTCTA CACTATTATA CAACTTTAGA
2221AGAACTCTGG AAAAGTTTTG ATCTTTGTGA AGACTATTTT AAACCTCCAT TTGGACCATA
2281TCCTGAAAAG AGTGGGAAGG ATTCCTTGGT TTCCATGAAA TGTTCATTGT TTCGGTTCTG
2341TCCGTGGTCA AAAGAATTGC CTTTCCAGCC TCCGGAGGGG AGCATTTCTT CACACCTAGG
2401ATCAGGAGCC AGTGACAGTG AGACCGAAGA GACCCGGAAA GCACTACCTA TACAATCATT
2461TTCACATGAA AAAGAGTCTC ACCAACACAG ACAACACTCG GTCCCAGTCA TCAGTCGCCC
2521AGGTTCCAAC GTCAAACCCA CCCTCCCTCC AATCCCTCAG GGCCGCAGGT TGCCAACTTT
2581CTTGTACAAA GTTGGCATTA TAAGAAAGCA TTGCTTATCA ATTTGTTGCA ACGAACAGGT
2641CACTATCAGT CAAAATAAAA TCATTATTGC CATCCAGGCT GATATCCCC

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.