Construct: ORF ccsbBroadEn_15837

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009870.1_s300c1, BRDN0000386052
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RSRC1 (51319)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51319 RSRC1 arginine and serine rich co... NM_001271834.1 100% 100%
2 human 51319 RSRC1 arginine and serine rich co... NM_001271838.2 82.6% 82.6% 320_493del
3 human 51319 RSRC1 arginine and serine rich co... NM_016625.3 82.6% 82.6% 320_493del
4 human 51319 RSRC1 arginine and serine rich co... XM_024453562.1 62.2% 56.3% (many diffs)
5 human 51319 RSRC1 arginine and serine rich co... XM_024453563.1 62.2% 56.3% (many diffs)
6 human 51319 RSRC1 arginine and serine rich co... XM_024453560.1 51.4% 46.7% (many diffs)
7 human 51319 RSRC1 arginine and serine rich co... XR_002959540.1 10.8% (many diffs)
8 mouse 66880 Rsrc1 arginine/serine-rich coiled... NM_025822.3 72.3% 76% (many diffs)
9 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319695.1 71.4% 75.1% (many diffs)
10 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319692.1 42.6% 44.6% (many diffs)
11 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319693.1 42.6% 44.6% (many diffs)
12 mouse 66880 Rsrc1 arginine/serine-rich coiled... XM_017319694.1 42.6% 44.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
894
ORF length:
828
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggg acgtcggtca tcagatactg aagaagaaag cagaagcaag agaaaaaaga
121aacaccgtag acggtcctcc tcgagcagtt cttcagatag tagaacatac agccgaaaga
181aaggaggaag gaaatcaaga tcaaagtcaa gatcttggtc cagagatctt cagcctcgtt
241cacattctta tgatagaaga cgcaggcatc gatcaagcag tagctcttct tatggctcca
301gaaggaaacg aagtcgaagt cgttcaaggg gtcgagggaa atcctataga gttcagaggt
361ctaggtcaaa aagcagaaca agaagggaat ctggaaacat caaagctgga ttagaacatc
421tgccaccagc tgaacaggcc aaagccagac tacagctggt tcttgaagct gctgcaaaag
481ctgatgaagc attgaaagcc aaagaaagaa atgaggaaga agcaaagaga agaaaggagg
541aagaccaagc caccctggta gaacaagtaa aaagagtaaa agaaattgaa gctattgaaa
601gtgattcttt tgttcagcag acattcagat caagtaaaga agtcaaaaag tcagtggaac
661ctagtgaagt gaaacaagca acttcaacat caggaccagc atcagcagtt gctgatccac
721ccagtactga aaaagaaata gatcctacca gcatccctac tgctatcaag taccaagatg
781acaattccct ggcccatcca aatttattta tcgagaaagc tgatgctgag gaaaaatggt
841tcaagagatt aattgctctc cgacaagaaa gactaatggg cagtcctgtg gcctnnccaa
901ctttcttgta caaagttggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)