Construct: ORF TRCN0000468968

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007632.1_s317c1
Derived from:
ccsbBroadEn_06833
DNA Barcode:
GCGGTTAAACATGACAGCCCCCAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RAC3 (5881)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468968
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5881 RAC3 Rac family small GTPase 3 NM_005052.3 99.8% 99.4% 16T>G
2 human 5881 RAC3 Rac family small GTPase 3 NM_001316307.2 87% 81.7% 16T>G;448_451delGGTG;510_511ins70
3 human 5880 RAC2 Rac family small GTPase 2 NM_002872.5 81.8% 88% (many diffs)
4 human 5879 RAC1 Rac family small GTPase 1 NM_006908.5 75.8% 92.1% (many diffs)
5 human 5879 RAC1 Rac family small GTPase 1 NM_018890.4 69.7% 83.8% (many diffs)
6 human 5880 RAC2 Rac family small GTPase 2 XM_006724286.3 67.6% 69.5% (many diffs)
7 mouse 170758 Rac3 RAS-related C3 botulinum su... NM_133223.4 89.2% 99.4% (many diffs)
8 mouse 19354 Rac2 RAS-related C3 botulinum su... NM_009008.3 80.9% 87.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
642
ORF length:
576
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca ggccatcaag ggcgtggtgg tcggcgacgg cgccgtgggg aagacatgct
121tgctgatcag ctacacgacc aacgccttcc ccggagagta catccccacc gtttttgaca
181actactctgc caacgtgatg gtggacggga aaccagtcaa cttgggGCTG TGGGACACAG
241CGGGTCAGGA GGACTACGAT CGGCTGCGGC CACTCTCCTA CCCCCAAACT GACGTCTTTC
301TGATCTGCTT CTCTCTGGTG AGCCCGGCCT CCTTCGAGAA TGTTCGTGCC AAGTGGTACC
361CGGAGGTGCG GCACCACTGC CCCCACACGC CCATCCTCCT GGTGGGCACC AAGCTGGACC
421TCCGCGACGA CAAGGACACC ATTGAGCGGC TGCGGGACAA GAAGCTGGCA CCCATCACCT
481ACCCACAGGG CCTGGCCATG GCCCGGGAGA TTGGCTCTGT GAAATACCTG GAGTGCTCAG
541CCCTGACCCA GCGGGGCCTG AAGACAGTGT TTGACGAGGC GATCCGCGCG GTGCTCTGCC
601CGCCCCCAGT GAAGAAGCCG GGGAAGAAGT GCACCGTCTT CTACCCAACT TTCTTGTACA
661AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
721AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
781AGGACGAGCG GTTAAACATG ACAGCCCCCA TACGCGTTAA GTCgacaatc aacctctgga
841ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)