Construct: ORF TRCN0000469035

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004855.1_s317c1
Derived from:
ccsbBroadEn_09192
DNA Barcode:
ACTACTTCGTCCCCATCTCTGACC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
L3MBTL3 (84456)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469035
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... NM_001007102.4 99.9% 99.8% 473C>A;750T>C
2 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... NM_001346550.1 99.9% 99.8% 473C>A;750T>C
3 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... NM_001346551.1 99.9% 99.8% 473C>A;750T>C
4 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... NM_032438.4 96.7% 96.6% 213_287del;548C>A;825T>C
5 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_005267161.4 96.7% 96.6% 213_287del;548C>A;825T>C
6 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_006715578.3 96.7% 96.6% 213_287del;548C>A;825T>C
7 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_011536179.3 96.7% 96.6% 213_287del;548C>A;825T>C
8 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_011536180.2 96.7% 96.6% 213_287del;548C>A;825T>C
9 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_011536181.2 96.7% 96.6% 213_287del;548C>A;825T>C
10 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_011536183.2 96.7% 96.6% 213_287del;548C>A;825T>C
11 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_011536184.2 96.7% 96.6% 213_287del;548C>A;825T>C
12 human 84456 L3MBTL3 L3MBTL histone methyl-lysin... XM_006715576.3 92.5% 92.5% 213_392del;653C>A;930T>C
13 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) NM_001347467.1 75.2% 78.4% (many diffs)
14 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) XM_006512735.3 75.2% 78.4% (many diffs)
15 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) NM_172787.3 73.1% 76.2% (many diffs)
16 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) XM_006512731.3 73.1% 76.2% (many diffs)
17 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) XM_006512732.3 73.1% 76.2% (many diffs)
18 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) XM_006512733.3 73.1% 76.2% (many diffs)
19 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) XM_017313935.1 70% 72.6% (many diffs)
20 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) XM_011243171.2 68% 70.5% (many diffs)
21 mouse 237339 L3mbtl3 l(3)mbt-like 3 (Drosophila) XM_011243172.2 68% 70.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2331
ORF length:
2265
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgac tgaatctgcc tctagcacaa gtggtcaaga gtttgatgtg ttcagtgtta
121tggactggaa agatggagtg ggcacgttac caggaagtga cttaaagttt cgggtaaatg
181agtttggagc cctggaagtt attacagatg agaatgagat ggaaaatgtt aaaaaagcaa
241ctgctaccac cacttggatg gtaccaactg ctcaagaagt cttttcagag aagactggga
301tgcctttcag gttgaaggat ccagtgaaag tagaagggct tcagttctgt gagaactgtt
361gtcagtatgg caacgtagat gagtgtcttt ctggaggaaa ctattgcagc cagaattgtg
421ctcggcacat caaagataaa gatcagaagg aagaaaggga cgtagaagaa gacaatgagg
481aagaagatcc taagtgtagt cggaagaaaa aaccaaaatt atctctgaaa gctgacaaca
541aggaggatgg agaagagaga gatgatgaaa tggagaacaa acaagatgta agaatcctga
601ggggttcgca gagagcacgg aggaaaagac gaggggattc ggctgtacta aagcagggtt
661tgcctcctaa aggaaagaaa gcgtggtgct gggcatccta cctggaagag gagaaagcgg
721tggcagtgcc ggcgaagctg ttcaaggagc atcaatcctt tccatataac aaaaatggat
781tcaaagttgg catgaaatta gaaggcgtgg atcccgagca tcagtctgtg tactgtgtcc
841tcaccgtcgc ggaggtttgt ggataccgga taaagcttca ctttgatggg tattctgatt
901gctatgactt ctgggtgaat gcagacgctc tggatatcca cccagttggg tggtgtgaga
961aaaccggcca caaactccat cctccaaaag ggtataaaga agaagaattc aattggcaga
1021cctatcttaa gacatgtaaa gctcaagctg ctcctaagtc attatttgaa aatcagaata
1081taacagtgat cccatcgggc tttcgagttg gtatgaagct tgaggcagta gacaaaaaga
1141atccctcatt catctgtgtt gctacggtaa cagatatggt ggacaatcgt ttcctggtac
1201attttgacaa ctgggatgag agctatgact attggtgtga agcatcaagt ccacatattc
1261atccagttgg ttggtgtaag gaacatagaa gaacccttat tactccacca ggttatccaa
1321atgtgaaaca tttttcttgg gataaatact tagaagaaac caattcttta cctgctcctg
1381caagagcttt caaagtgaaa cctcctcatg gattccagaa aaaaatgaag cttgaggttg
1441tagacaaaag gaaccctatg tttattagag tagcaactgt ggcagacaca gatgatcacc
1501gggtaaaagt tcactttgat ggctggaaca attgctatga ttactggata gatgcagatt
1561ctcctgatat tcaccctgta ggctggtgtt caaaaacagg acatcccctt cagcctcctt
1621tgagcccctt agaattaatg gaagcttcag aacatggtgg atgctcaacc ccgggatgta
1681aagggattgg ccatttcaag agagcgagac atctgggccc tcacagtgct gccaactgtc
1741cctattcaga aatcaatttg aataaagacc gtatttttcc agaccgctta agtggtgaga
1801tgcctccggc tagtccgtca tttccaagaa ataaaaggac agatgcaaat gaaagctctt
1861cttcccctga aaTCAGAGAC CAGCATGCTG ATGATGTCAA AGAAGACTTT GAAGAGAGAA
1921CAGAAAGTGA AATGAGAACA TCACATGAAG CCAGAGGTGC CCGGGAAGAA CCCACCGTCC
1981AGCAGGCACA GCGTCGGTCA GCTGTCTTTC TGTCCTTTAA GTCCCCAATT CCATGTCTGC
2041CCTTGCGCTG GGAGCAGCAA AGCAAACTTC TTCCAACTGT CGCAGGAATC CCTGCCAGTA
2101AAGTTTCCAA ATGGAGCACA GACGAGGTGT CAGAATTTAT ACAGAGCTTA CCTGGGTGTG
2161AAGAACATGG AAAGGTATTT AAAGATGAAC AAATTGATGG AGAAGCATTT CTACTTATGA
2221CTCAAACAGA CATTGTTAAA ATTATGAGCA TTAAACTGGG CCCTGCTCTC AAAATTTTCA
2281ATTCCATCCT GATGTTCAAA GCTGCAGAGA AGAATTCTCA CAATGAACTT TGCCCAACTT
2341TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
2401CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
2461CTTGTGGAAA GGACGAACTA CTTCGTCCCC ATCTCTGACC ACGCGTTAAG TCgacaatca
2521acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)