Construct: ORF TRCN0000469052

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000370.1_s317c1
Derived from:
ccsbBroadEn_15494
DNA Barcode:
TCAGTACTAGGAAGGTCTCTACGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MAX (4149)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469052
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4149 MAX MYC associated factor X NM_145112.3 99.7% 99.3% 382G>T
2 human 4149 MAX MYC associated factor X NM_002382.5 94.1% 93.7% 37_63del;409G>T
3 human 4149 MAX MYC associated factor X XM_011536773.3 69.7% 48.7% (many diffs)
4 human 4149 MAX MYC associated factor X NM_145113.3 57.9% 55.6% (many diffs)
5 human 4149 MAX MYC associated factor X NM_001320415.2 54.7% 39.8% (many diffs)
6 human 4149 MAX MYC associated factor X XM_017021312.2 54.7% 39.8% (many diffs)
7 human 4149 MAX MYC associated factor X XM_017021313.1 54.7% 39.8% (many diffs)
8 human 4149 MAX MYC associated factor X NM_001271069.1 44.5% 32.4% (many diffs)
9 human 4149 MAX MYC associated factor X NM_001271068.1 42.9% 34.3% (many diffs)
10 human 4149 MAX MYC associated factor X NM_197957.3 42% 30.6% (many diffs)
11 human 4149 MAX MYC associated factor X NM_145114.2 40.7% 32.5% (many diffs)
12 human 4149 MAX MYC associated factor X NR_073137.1 22.2% (many diffs)
13 human 4149 MAX MYC associated factor X XR_001750327.2 21.5% (many diffs)
14 human 4149 MAX MYC associated factor X XR_943452.3 20.9% (many diffs)
15 human 4149 MAX MYC associated factor X XR_001750326.2 20.7% (many diffs)
16 human 4149 MAX MYC associated factor X XR_943450.3 20.5% (many diffs)
17 human 4149 MAX MYC associated factor X XR_943451.3 20.3% (many diffs)
18 human 4149 MAX MYC associated factor X XR_002957553.1 17.3% (many diffs)
19 mouse 17187 Max Max protein NM_001146176.1 95.5% 98.6% (many diffs)
20 mouse 17187 Max Max protein NM_008558.2 90.2% 93.1% (many diffs)
21 mouse 17187 Max Max protein XM_006515523.3 76.4% 75.4% (many diffs)
22 mouse 17187 Max Max protein XM_006515524.3 56% 55.6% (many diffs)
23 mouse 17187 Max Max protein XM_017314968.1 39.2% 40.5% (many diffs)
24 mouse 17187 Max Max protein XR_001780418.1 20.4% (many diffs)
25 mouse 17187 Max Max protein XR_381483.3 19.8% (many diffs)
26 mouse 17187 Max Max protein XR_872708.2 19.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
519
ORF length:
453
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag cgataacgat gacatcgagg tggagagcga cgctgacaaa cgggctcatc
121ataatgcact ggaacgaaaa cgtagggacc acatcaaaga cagctttcac agtttgcgGG
181ACTCAGTCCC ATCACTCCAA GGAGAGAAGG CATCCCGGGC CCAAATCCTA GACAAAGCCA
241CAGAATATAT CCAGTATATG CGAAGGAAAA ACCACACACA CCAGCAAGAT ATTGACGACC
301TCAAGCGGCA GAATGCTCTT CTGGAGCAGC AAGTCCGTGC ACTGGAGAAG GCGAGGTCAA
361GTGCCCAACT GCAGACCAAC TACCCCTCCT CAGACAACAG CCTCTACACC AACGCCAAGG
421GCAGCACCAT CTCTGCCTTC GATGGGTGCT CGGACTCCAG CTCGGAGTCT GAGCCTGAAG
481AGCCCCAAAG CAGGAAGAAG CTCCGGATGG AGGCCAGCTA CCCAACTTTC TTGTACAAAG
541TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
601GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
661ACGATCAGTA CTAGGAAGGT CTCTACGAAC GCGTTAAGTC gacaatcaac ctctggatta
721caaaatttgt gaaagatt

Download FASTA (ORF) (Full)