Construct: ORF TRCN0000469969

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010903.1_s317c1
Derived from:
ccsbBroadEn_10758
DNA Barcode:
TATCAGCAGTAACGCAGCTATGGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CTBP2 (1488)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469969
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1488 CTBP2 C-terminal binding protein 2 NM_001363508.2 99.9% 99.8% 1078G>A
2 human 1488 CTBP2 C-terminal binding protein 2 NM_001083914.3 85.3% 82.2% (many diffs)
3 human 1488 CTBP2 C-terminal binding protein 2 NM_001290214.3 85.3% 82.2% (many diffs)
4 human 1488 CTBP2 C-terminal binding protein 2 NM_001290215.3 85.3% 82.2% (many diffs)
5 human 1488 CTBP2 C-terminal binding protein 2 NM_001321012.2 85.3% 82.2% (many diffs)
6 human 1488 CTBP2 C-terminal binding protein 2 NM_001321013.2 85.3% 82.2% (many diffs)
7 human 1488 CTBP2 C-terminal binding protein 2 NM_001321014.2 85.3% 82.2% (many diffs)
8 human 1488 CTBP2 C-terminal binding protein 2 NM_001329.4 85.3% 82.2% (many diffs)
9 human 1488 CTBP2 C-terminal binding protein 2 XM_005269561.3 85.3% 82.2% (many diffs)
10 human 1488 CTBP2 C-terminal binding protein 2 XM_005269564.3 85.3% 82.2% (many diffs)
11 human 1488 CTBP2 C-terminal binding protein 2 XM_005269567.3 85.3% 82.2% (many diffs)
12 human 1488 CTBP2 C-terminal binding protein 2 XM_005269568.5 85.3% 82.2% (many diffs)
13 human 1488 CTBP2 C-terminal binding protein 2 XM_005269569.3 85.3% 82.2% (many diffs)
14 human 1488 CTBP2 C-terminal binding protein 2 XM_005269571.3 85.3% 82.2% (many diffs)
15 human 1488 CTBP2 C-terminal binding protein 2 XM_005269572.4 85.3% 82.2% (many diffs)
16 human 1488 CTBP2 C-terminal binding protein 2 XM_006717642.3 85.3% 82.2% (many diffs)
17 human 1488 CTBP2 C-terminal binding protein 2 XM_011539351.2 85.3% 82.2% (many diffs)
18 human 1488 CTBP2 C-terminal binding protein 2 XM_011539353.2 85.3% 82.2% (many diffs)
19 human 1488 CTBP2 C-terminal binding protein 2 XM_011539354.2 85.3% 82.2% (many diffs)
20 human 1488 CTBP2 C-terminal binding protein 2 XM_011539355.2 85.3% 82.2% (many diffs)
21 human 1488 CTBP2 C-terminal binding protein 2 XM_017015756.2 85.3% 82.2% (many diffs)
22 human 1488 CTBP2 C-terminal binding protein 2 XM_017015757.2 85.3% 82.2% (many diffs)
23 human 1488 CTBP2 C-terminal binding protein 2 XM_024447830.1 85.3% 82.2% (many diffs)
24 human 1488 CTBP2 C-terminal binding protein 2 XM_011539357.2 81.8% 81.6% 0_1ins279;799G>A
25 human 1488 CTBP2 C-terminal binding protein 2 XM_011539358.2 81.8% 81.6% 0_1ins279;799G>A
26 human 1488 CTBP2 C-terminal binding protein 2 XM_024447831.1 81.8% 81.6% 0_1ins279;799G>A
27 human 1488 CTBP2 C-terminal binding protein 2 NM_022802.3 47.4% 44.3% (many diffs)
28 human 403340 MGC70870 C-terminal binding protein ... NR_003682.1 39.8% (many diffs)
29 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_009980.4 75.6% 81.8% (many diffs)
30 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507308.3 75.6% 81.8% (many diffs)
31 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507309.3 75.6% 81.8% (many diffs)
32 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507310.3 75.6% 81.8% (many diffs)
33 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507311.3 75.6% 81.8% (many diffs)
34 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507312.3 75.6% 81.8% (many diffs)
35 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507314.3 73.9% 82.4% (many diffs)
36 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_001347623.1 72.9% 81.2% (many diffs)
37 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507315.3 72.9% 81.2% (many diffs)
38 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_001170744.1 42.7% 43.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1605
ORF length:
1539
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag accaggactt ccaggcccca cagggttgtg cgctcagacc tcaagtaggg
121gccagaagag tgtactgaaa cagaaggaat cttgtggaat ttggcagttg taccattttc
181ttagcagaaa acaggagccc aggtgggagc catgtgtgtc gggttcctcg tcaggtgacg
241gtgctgttgc ggatctcgcg gatgagctga gggggtatcc agctttgtgc tgcacgcttc
301ctgtccactc atacaggtcg tgggctggta tccgccccca gatcatgaac ggccccctgc
361acccccgccc cctggtggcg ctgctggacg gccgcgactg cactgtggag atgcccatcc
421tgaaggacct ggccactgtg gccttctgtg acgcgcagtc gacgcaggaa atccacgaga
481aggttctaaa cgaagccgtg ggcgccatga tgtaccacac catcaccctc accagggagg
541acctggagaa gttcaaggcc ctgagagtga tcgtgcggat aggcagtggc tatgacaacg
601tggacatcaa ggctgccggc gagctcggaa ttgccgtgtg caacatcccg tctgcagccg
661tggaagagac agcggactct accatctgcc acatcctcaa cctgtaccgg aggaacacgt
721ggctgtacca ggcactgcgg gaaggcacgc gggttcagag cgtggagcag atccgcgagg
781tggcctcggg agcggcccgc atccgtgggg agacgctggg cctcattggc tttggtcgca
841cggggcaggc ggttgcagtt cgagccaagg cctttggatt cagcgtcata ttttatgacc
901cctacttgca ggatgggatc gagcggtccc tgggcgtgca gagggtctac accctgcagg
961atttgctgta tcagagcgac tgcgtctcct tgcactgcaa tctcaacgaa cataaccacc
1021acctcatcaa tgactttacc ataaagcaga tgaggcaggg agcattcctt gtgaacgcag
1081cccgtggcgg cctggtggac gagaaagcct tagcacaagc cctcaaggag ggcaggatac
1141gaagggcagc cctcgacgtg catgagtcag agcccTTCAG CTTTGCTCAG GGTCCGTTGA
1201AAGATGCCCC GAATCTCATC TGCACTCCTC ACACTGCCTG GTACAGTGAG CAGGCGTCAC
1261TGGAGATGAG GGAGGCAGCT GCCACCGAGA TCCGCCGAGC CATCACAGGT CGCATCCCAG
1321AAAGCTTAAG AAATTGTGTG AACAAGGAAT TCTTTGTCAC ATCAGCGCCT TGGTCAGTAA
1381TAGACCAGCA AGCAATTCAT CCTGAGCTCA ATGGTGCCAC ATACAGATAT CCGCCAGGCA
1441TCGTGGGTGT GGCTCCAGGA GGACTTCCTG CAGCCATGGA AGGGATCATC CCTGGAGGCA
1501TCCCAGTGAC TCACAACCTC CCGACAGTGG CACATCCTTC CCAAGCGCCC TCTCCCAACC
1561AGCCCACAAA ACACGGGGAC AATCGAGAGC ACCCCAACGA GCAATACCCA ACTTTCTTGT
1621ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
1681AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
1741GAAAGGACGA TATCAGCAGT AACGCAGCTA TGGGACGCGT TAAGTCgaca atcaacctct
1801ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)