Construct: ORF TRCN0000470995

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017864.1_s317c1
Derived from:
ccsbBroadEn_10846
DNA Barcode:
TTTTATAAGTCTGACATTTAGAAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GGT1 (2678)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470995
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 728226 GGTLC3 gamma-glutamyltransferase l... NM_001355479.1 97.4% 93.3% (many diffs)
2 human 728441 GGT2 gamma-glutamyltransferase 2 XM_011530621.2 97.4% 92.8% (many diffs)
3 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029185.1 97.4% 92.8% (many diffs)
4 human 92086 GGTLC1 gamma-glutamyltransferase l... NM_178311.3 97% 96% (many diffs)
5 human 92086 GGTLC1 gamma-glutamyltransferase l... NM_178312.3 97% 96% (many diffs)
6 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_005260865.4 97% 96% (many diffs)
7 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_017028126.2 97% 96% (many diffs)
8 human 91227 GGTLC2 gamma-glutamyltransferase l... NM_199127.2 93.6% 90.2% (many diffs)
9 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_024452301.1 93.6% 90.2% (many diffs)
10 human 91227 GGTLC2 gamma-glutamyltransferase l... NM_001282879.1 88% 87.6% (many diffs)
11 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_005261817.3 88% 87.6% (many diffs)
12 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_011530497.1 88% 87.6% (many diffs)
13 human 728226 GGTLC3 gamma-glutamyltransferase l... XM_024452264.1 87% 83.3% (many diffs)
14 human 728441 GGT2 gamma-glutamyltransferase 2 XM_006724396.2 87% 82.9% (many diffs)
15 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724929.2 87% 82.9% (many diffs)
16 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029184.1 87% 82.9% (many diffs)
17 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_005260863.4 86.6% 85.7% (many diffs)
18 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_005260864.4 86.6% 85.7% (many diffs)
19 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_011529391.3 86.6% 85.7% (many diffs)
20 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_005261818.2 85% 81.8% (many diffs)
21 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_011529392.2 84% 83.1% (many diffs)
22 human 92086 GGTLC1 gamma-glutamyltransferase l... XM_011529393.2 84% 83.1% (many diffs)
23 human 91227 GGTLC2 gamma-glutamyltransferase l... XM_005261815.3 80.7% 80.3% (many diffs)
24 human 728441 GGT2 gamma-glutamyltransferase 2 XM_005261890.4 68.3% 65.1% (many diffs)
25 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724928.3 68.3% 65.1% (many diffs)
26 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029183.1 68.3% 65.1% (many diffs)
27 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030145.2 59.1% 56.3% (many diffs)
28 human 728441 GGT2 gamma-glutamyltransferase 2 XM_006724395.4 54.4% 51.8% (many diffs)
29 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029182.2 53.2% 50.7% (many diffs)
30 human 728441 GGT2 gamma-glutamyltransferase 2 XM_006724392.3 50% 47.6% (many diffs)
31 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724924.4 50% 47.6% (many diffs)
32 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029179.2 50% 47.6% (many diffs)
33 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029180.1 50% 47.6% (many diffs)
34 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029181.2 50% 47.6% (many diffs)
35 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030144.1 50% 47.6% (many diffs)
36 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030143.2 44.7% 42.6% (many diffs)
37 human 102724197 LOC102724197 inactive glutathione hydrol... XM_006724921.4 42.4% 40.4% (many diffs)
38 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030136.2 42.4% 40.4% (many diffs)
39 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030137.2 42.4% 40.4% (many diffs)
40 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030140.2 42.4% 40.4% (many diffs)
41 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030141.2 42.4% 40.4% (many diffs)
42 human 102724197 LOC102724197 inactive glutathione hydrol... XM_017030142.2 42.4% 40.4% (many diffs)
43 human 2678 GGT1 gamma-glutamyltransferase 1 NM_001288833.2 39.4% 39.5% 1_1032del;1041C>T
44 human 2678 GGT1 gamma-glutamyltransferase 1 NM_013421.3 39.4% 39.5% 1_1032del;1041C>T
45 human 2678 GGT1 gamma-glutamyltransferase 1 NM_013430.2 39.4% 39.5% 1_1032del;1041C>T
46 human 102724197 LOC102724197 inactive glutathione hydrol... XM_011546256.3 38.5% 36.7% (many diffs)
47 human 728441 GGT2 gamma-glutamyltransferase 2 NM_001351304.1 38.2% 36.4% (many diffs)
48 human 728441 GGT2 gamma-glutamyltransferase 2 XM_017029186.2 38.2% 36.4% (many diffs)
49 human 2679 GGT3P gamma-glutamyltransferase 3... NR_003267.1 32.4% (many diffs)
50 human 102724823 LOC102724823 inactive glutathione hydrol... XR_002958856.1 17.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
741
ORF length:
675
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgac ctctgagttc ttcgctgccc agctccgggc ccagatctct gacgacacca
121ctcacccgat ctcctactac aagcccgagt tctacacgcc ggatgacggg ggcactgctc
181acctgtctgt cgtcgcagag gacggcagtg ctgtgtccgc caccagcacc atcaacctct
241actttggctc caaggtccgc tccccggtca gcgggatcct gttcaataat gaaatggacg
301acttcagctc tcccagcatc accaacgagt ttggggtacc ccccTCACCT GCCAATTTCA
361TCCAGCCAGG GAAGCAGCCG CTCTCGTCCA TGTGCCCGAC GATCATGGTG GGCCAGGACG
421GCCAGGTCCG GATGGTGGTG GGAGCTGCTG GGGGCACACA GATCACCACG GCCACTGCAC
481TGGCCATCAT CTACAACCTC TGGTTCGGCT ATGACGTGAA GCGGGCCGTG GAGGAGCCCC
541GGCTGCACAA CCAGCTTCTG CCCAACGTCA CGACAGTGGA GAGAAACATT GACCAGGCAG
601TGACTGCAGC CCTGGAGACC CGGCACCATC ACACCCAGAT CGCGTCCACC TTCATCGCTG
661TGGTGCAAGC CATCGTCCGC ACGGCTGGTG GCTGGGCAGC TGCCTCGGAC TCCAGGAAAG
721GCGGGGAGCC TGCCGGCTAC TGCCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
781CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
841AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGATTTT ATAAGTCTGA
901CATTTAGAAT ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)