Construct: ORF TRCN0000471114

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019023.2_s317c1
Derived from:
ccsbBroadEn_14526
DNA Barcode:
CACTAGGCCAACTGCGTGAGATAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ABL2 (27)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471114
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 27 ABL2 ABL proto-oncogene 2, non-r... XM_005245088.2 99.9% 100% 3438delG
2 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_005158.5 98.1% 98.2% 110_172del;3501delG
3 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_001168236.2 97.1% 95.5% (many diffs)
4 human 27 ABL2 ABL proto-oncogene 2, non-r... XM_017001035.1 94.9% 93.7% (many diffs)
5 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_007314.4 94.5% 94.1% (many diffs)
6 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_001168239.2 90.9% 91% 1950_1951ins309;3129delG
7 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_001136000.3 89.3% 89.3% 110_172del;2013_2014ins309;3192delG
8 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_001168238.2 88.2% 86.7% (many diffs)
9 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_001168237.2 85.9% 85.4% (many diffs)
10 human 27 ABL2 ABL proto-oncogene 2, non-r... XR_921765.1 46.3% (many diffs)
11 human 27 ABL2 ABL proto-oncogene 2, non-r... XR_921764.3 45.2% (many diffs)
12 human 27 ABL2 ABL proto-oncogene 2, non-r... NM_001136001.1 43.7% 41.6% (many diffs)
13 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496617.3 89.4% 93.3% (many diffs)
14 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496614.3 88% 91.7% (many diffs)
15 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496613.3 87.9% 91.7% (many diffs)
16 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496616.3 87.4% 90.4% (many diffs)
17 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496615.3 87.3% 90.3% (many diffs)
18 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_011238737.2 85.4% 89.2% (many diffs)
19 mouse 11352 Abl2 v-abl Abelson murine leukem... NM_009595.3 85.3% 89.1% (many diffs)
20 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496622.3 81.1% 85.2% (many diffs)
21 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496620.3 79.8% 83.7% (many diffs)
22 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_006496621.3 79.2% 82.3% (many diffs)
23 mouse 11352 Abl2 v-abl Abelson murine leukem... XM_011238738.2 77.4% 81.2% (many diffs)
24 mouse 11352 Abl2 v-abl Abelson murine leukem... NM_001136104.1 77.3% 81.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3507
ORF length:
3438
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggtccttggg acagttctcc ttccacctaa tagttatggc agagatcagg
121acacttcact ttgctgcctg tgcactgagg cctcagaatc tgctctaccc gacttaacag
181aagctttgca tcgtccctat ggttgtgatg ttgaacccca ggcactaaat gaggctatca
241ggtggagctc caaggagaac ttgctcggag ccactgagag tgaccctaat ctcttcgttg
301cactttatga ttttgtagca agtggtgata acacactcag catcactaaa ggtgaaaagc
361tacgagtcct tggttacaac cagaatggtg agtggagtga agttcgctct aagaatgggc
421agggctgggt gccaagcaac tacatcaccc cagtgaacag cctggaaaaa cactcctggt
481accatggacc tgtgtcacgc agtgcagctg agtatctgct cagcagtcta atcaatggca
541gcttcctggt gcgagaaagt gagagtagcc ctgggcagct gtccatctcg ctcaggtacg
601agggacgtgt gtatcactac aggatcaata ccactgcaga tggcaaggtg tatgtgactg
661ctgagagccg cttcagcacc ttggcagagc ttgtacacca tcactccaca gtggctgatg
721ggctggtgac aacattacac tacccagcac ccaagtgtaa taagcctaca gtctatggtg
781tgtcccccat ccacgacaaa tgggaaatgg agcgaacaga tattaccatg aagcacaaac
841ttgggggcgg tcagtatgga gaggtttacg ttggcgtctg gaagaaatac agccttacag
901ttgctgtgaa aacattgaag gaagatacca tggaggtaga agaattcctg aaagaagctg
961cagtaatgaa ggaaatcaag catcctaatc tggtacaact tttaggtgtg tgtactttgg
1021agccaccatt ttacattgtg actgaataca tgccatacgg gaatttgctg gattacctcc
1081gagaatgcaa ccgagaagag gtgactgcag ttgtgctgct ctacatggcc actcagattt
1141cttctgcaat ggagtactta gagaagaaga atttcatcca tagagatctt gcagctcgta
1201actgcctagt gggagaaaac catgtggtaa aagtggctga ctttggctta agtagattga
1261tgactggaga cacttatact gctcatgctg gagccaaatt tcctattaag tggacagcac
1321cagagagtct tgcctacaat accttctcaa ttaaatctga cgtctgggct tttggggtat
1381tgttgtggga aattgctacc tatggaatgt caccatatcc aggtattgac ctgtctcagg
1441tctatgacct actagaaaaa ggatatcgaa tggaacagcc tgagggatgc ccccctaagg
1501tttatgaact tatgagagca tgctggaagt ggagccctgc cgataggccc tcttttgctg
1561aaacacacca agcttttgaa accatgttcc atgactccag catttctgaa gaggtagctg
1621aggagcttgg gagagccgcc tcctcgtcat ctgttgttcc atacctgccc cggctaccta
1681tacttccttc caagactcgg acactgaaga aacaggtgga gaacaaggag aacattgaag
1741gggcacaaga tgccacagaa aattctgctt ccagtttagc accagggttc atcagaggtg
1801cacaggcctc tagtggatcc ccagcactgc ctcgaaagca aagagacaag tcacccagca
1861gcctcttgga agatgccaaa gagacatgct tcaccaggga taggaagggg ggcttcttca
1921gctccttcat gaagaagaga aatgctccta caccccccaa acgcagcagc tccttccgag
1981aaatggagaa tcagccccat aagaaatacg aactcacggg taacttctca tctgttgctt
2041ctctacagca tgctgatggg ttctctttca ctcctgccca gcaagaggcg aatctggtgc
2101cacccaagtg ctatgggggg agctttgcac agaggaacct ctgtaatgac gacggtggtg
2161ggggtggggg cagtggcact gctgggggtg ggtggtctgg catcacaggc ttctttacac
2221cacgcttaat caaaaagaca ctgggcttac gagcaggtaa acccacagcc agtgatgaca
2281cttccaagcc ttttccaagg tcaaactcta catcttccat gtcctcaggg cttccagagc
2341aggataggat ggcaatgacc cttcccagga actgccagag gtccaaactc cagctggaaa
2401ggacagtgtc cacctcttct cagccagaag agaatgtgga cagggccaat gacatgcttc
2461caaaaaaatc agaggaaagt gctgctccaa gcagggagag accaaaagcc aagttattgc
2521ccagaggagc cacagctctt cctctcagaa caccctctgg ggatctagcc attacagaga
2581aggaccctcc aggggtggga gtggctggag tggcagctgc ccccaagggt aaagagaaga
2641atggtggggc acgacttggg atggctggag ttccagagga tggagagcag ccgggctggc
2701cttctccagc caaggctgcc cccgtcctcc caaccactca caaccacaaa gtgccagtcc
2761ttatctcacc cactctgaaa cacactccag ctgacgtgca gctcattggc acagactctc
2821aggggaataa attcaagctc ttatctgagc atcaggtcac atcctctgga gacaaggacc
2881gaccccgacg ggtaaaacca aagtgtgccc cacccccacc accagtgatg agactactgc
2941agcatccgtc catctgctca gaccctacag aagagccaac tgccctaact gcaggacagt
3001ccacatcaga aacacaggaa ggaggaaaga aggcagctct gggcgcagtg cccatcagtg
3061ggaaagctgg gaggccagtg atgcctccac ctcaagtgcc tctgcccaca tcttccatct
3121cgccagccaa aatggccaat ggcacagcag gtactaaagt ggcTCTGAGA AAAACCAAAC
3181AGGCCGCTGA GAAAATCTCA GCAGACAAAA TCAGCAAAGA GGCCCTGCTG GAATGTGCTG
3241ACCTACTGTC CAGTGCACTC ACGGAACCTG TGCCCAACAG CCAGCTGGTA GACACTGGAC
3301ACCAGCTGCT TGACTACTGC TCAGGCTATG TGGACTGCAT CCCTCAAACT CGCAACAAAT
3361TTGCCTTCCG AGAGGCTGTG AGCAAACTGG AACTCAGCCT GCAGGAGCTA CAGGTTTCTT
3421CAGCAGCTGC TGGTGTGCCC GGGACAAACC CTGTCCTTAA TAACTTATTG TCATGTGTAC
3481AGGAAATCAG TGATGTGGTG CAGAGGCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
3541AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
3601TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAC ACTAGGCCAA
3661CTGCGTGAGA TAAACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
3721att

Download FASTA (ORF) (Full)