Construct: ORF TRCN0000478688

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017043.1_s317c1
Derived from:
ccsbBroadEn_15391
DNA Barcode:
GCTGGCTACGTTCAGGCTCCGTCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CTBP2 (1488)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478688
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1488 CTBP2 C-terminal binding protein 2 NM_001083914.3 100% 100%
2 human 1488 CTBP2 C-terminal binding protein 2 NM_001290214.3 100% 100%
3 human 1488 CTBP2 C-terminal binding protein 2 NM_001290215.3 100% 100%
4 human 1488 CTBP2 C-terminal binding protein 2 NM_001321012.2 100% 100%
5 human 1488 CTBP2 C-terminal binding protein 2 NM_001321013.2 100% 100%
6 human 1488 CTBP2 C-terminal binding protein 2 NM_001321014.2 100% 100%
7 human 1488 CTBP2 C-terminal binding protein 2 NM_001329.4 100% 100%
8 human 1488 CTBP2 C-terminal binding protein 2 XM_005269561.3 100% 100%
9 human 1488 CTBP2 C-terminal binding protein 2 XM_005269564.3 100% 100%
10 human 1488 CTBP2 C-terminal binding protein 2 XM_005269567.3 100% 100%
11 human 1488 CTBP2 C-terminal binding protein 2 XM_005269568.5 100% 100%
12 human 1488 CTBP2 C-terminal binding protein 2 XM_005269569.3 100% 100%
13 human 1488 CTBP2 C-terminal binding protein 2 XM_005269571.3 100% 100%
14 human 1488 CTBP2 C-terminal binding protein 2 XM_005269572.4 100% 100%
15 human 1488 CTBP2 C-terminal binding protein 2 XM_006717642.3 100% 100%
16 human 1488 CTBP2 C-terminal binding protein 2 XM_011539351.2 100% 100%
17 human 1488 CTBP2 C-terminal binding protein 2 XM_011539353.2 100% 100%
18 human 1488 CTBP2 C-terminal binding protein 2 XM_011539354.2 100% 100%
19 human 1488 CTBP2 C-terminal binding protein 2 XM_011539355.2 100% 100%
20 human 1488 CTBP2 C-terminal binding protein 2 XM_017015756.2 100% 100%
21 human 1488 CTBP2 C-terminal binding protein 2 XM_017015757.2 100% 100%
22 human 1488 CTBP2 C-terminal binding protein 2 XM_024447830.1 100% 100%
23 human 1488 CTBP2 C-terminal binding protein 2 XM_011539357.2 94.3% 94.3% 0_1ins75
24 human 1488 CTBP2 C-terminal binding protein 2 XM_011539358.2 94.3% 94.3% 0_1ins75
25 human 1488 CTBP2 C-terminal binding protein 2 XM_024447831.1 94.3% 94.3% 0_1ins75
26 human 1488 CTBP2 C-terminal binding protein 2 NM_001363508.2 85.4% 82.4% (many diffs)
27 human 1488 CTBP2 C-terminal binding protein 2 NM_022802.3 44% 43.7% (many diffs)
28 human 403340 MGC70870 C-terminal binding protein ... NR_003682.1 37% (many diffs)
29 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_009980.4 89.5% 99.5% (many diffs)
30 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507308.3 89.5% 99.5% (many diffs)
31 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507309.3 89.5% 99.5% (many diffs)
32 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507310.3 89.5% 99.5% (many diffs)
33 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507311.3 89.5% 99.5% (many diffs)
34 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507312.3 89.5% 99.5% (many diffs)
35 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507314.3 86.4% 95.2% (many diffs)
36 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_001347623.1 84.1% 93.9% (many diffs)
37 mouse 13017 Ctbp2 C-terminal binding protein 2 XM_006507315.3 84.1% 93.9% (many diffs)
38 mouse 13017 Ctbp2 C-terminal binding protein 2 NM_001170744.1 39.8% 43.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1401
ORF length:
1335
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ccttgtggat aagcacaaag tcaagagaca gcgattggac agaatttgtg
121aaggtatccg cccccagatc atgaacggcc ccctgcaccc ccgccccctg gtggcgctgc
181tggacggccg cgactgcact gtggagatgc ccatcctgaa ggacctggcc actgtggcct
241tctgtgacgc gcagtcgacg caggaaatcc acgagaaggt tctaaacgaa gccgtgggcg
301ccatgatgta ccacaccatc accctcacca gggaggacct ggagaagttc aaggccctga
361gagtgatcgt gcggataggc agtggctatg acaacgtgga catcaaggct gccggcgagc
421tcggaattgc cgtgtgcaac atcccgtctg cagccgtgga agagacagcg gactctacca
481tctgccacat cctcaacctg taccggagga acacgtggct gtaccaggca ctgcgggaag
541gcacgcgggt tcagagcgtg gagcagatcc gcgaggtggc ctcgggagcg gcccgcatcc
601gtggggagac gctgggcctc attggctttg gtcgcacggg gcaggcggtt gcagttcgag
661ccaaggcctt tggattcagc gtcatatttt atgaccccta cttgcaggat gggatcgagc
721ggtccctggg cgtgcagagg gtctacaccc tgcaggattt gctgtatcag agcgactgcg
781tctccttgca ctgcaatctc aacgaacata accaccacct catcaatgac tttaccataa
841agcagatgag gcagggagca ttccttgtga acgcagcccg tggcggcctg gtggacgaga
901aagccttagc acaagccctc aaggagggca ggatacgagg ggcagccctc gacgtgcatg
961agtcagagcc cttcagcttt gctcagggtc cgttgaaaga tgccccgaat ctcatctgca
1021ctcctcacac tgccTGGTAC AGTGAGCAGG CGTCACTGGA GATGAGGGAG GCAGCTGCCA
1081CCGAGATCCG CCGAGCCATC ACAGGTCGCA TCCCAGAAAG CTTAAGAAAT TGTGTGAACA
1141AGGAATTCTT TGTCACATCA GCGCCTTGGT CAGTAATAGA CCAGCAAGCA ATTCATCCTG
1201AGCTCAATGG TGCCACATAC AGATATCCGC CAGGCATCGT GGGTGTGGCT CCAGGAGGAC
1261TTCCTGCAGC CATGGAAGGG ATCATCCCTG GAGGCATCCC AGTGACTCAC AACCTCCCGA
1321CAGTGGCACA TCCTTCCCAA GCGCCCTCTC CCAACCAGCC CACAAAACAC GGGGACAATC
1381GAGAGCACCC CAACGAGCAA TACCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1441CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1501AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAGCTG GCTACGTTCA
1561GGCTCCGTCT ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)