Construct: ORF TRCN0000480211

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010026.4_s317c1
Derived from:
ccsbBroadEn_15139
DNA Barcode:
AGCAATTCTAAGCAATCTCCAACG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDK15 (65061)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480211
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 65061 CDK15 cyclin dependent kinase 15 NM_139158.2 90.8% 90.8% 1048_1152del
2 human 65061 CDK15 cyclin dependent kinase 15 XM_005246782.4 90.8% 90.8% 1048_1152del
3 human 65061 CDK15 cyclin dependent kinase 15 NM_001261436.1 87.2% 87.2% 1_153del
4 human 65061 CDK15 cyclin dependent kinase 15 XM_011511650.2 84.7% 84.4% 1_153del;1199_1202delTCAC;1205_1236del
5 human 65061 CDK15 cyclin dependent kinase 15 NM_001261435.1 81.3% 81.1% 1_153del;1199_1202delTTTC;1205_1287del
6 human 65061 CDK15 cyclin dependent kinase 15 NM_001366386.1 80.2% 80.2% 1_153del;1201_1305del
7 human 65061 CDK15 cyclin dependent kinase 15 XM_011511652.1 75.8% 74% (many diffs)
8 human 65061 CDK15 cyclin dependent kinase 15 XM_011511654.2 72.9% 72.5% (many diffs)
9 human 65061 CDK15 cyclin dependent kinase 15 XM_011511655.2 57.2% 57.2% 0_1ins387;661_765del
10 human 65061 CDK15 cyclin dependent kinase 15 XM_011511656.2 57.2% 57.2% 0_1ins387;661_765del
11 human 65061 CDK15 cyclin dependent kinase 15 XR_922991.2 54.3% 1_239del;937_1075del;1153_1154ins272
12 human 65061 CDK15 cyclin dependent kinase 15 XM_011511657.2 53.1% 52% (many diffs)
13 human 65061 CDK15 cyclin dependent kinase 15 XR_922990.1 27.1% 1_239del;1092_1093ins49;1238_3624del
14 mouse 271697 Cdk15 cyclin-dependent kinase 15 NM_001033373.2 72.8% 75.5% (many diffs)
15 mouse 271697 Cdk15 cyclin-dependent kinase 15 XM_006496050.3 72.6% 75.5% (many diffs)
16 mouse 271697 Cdk15 cyclin-dependent kinase 15 XM_006496048.3 70.3% 72.9% (many diffs)
17 mouse 271697 Cdk15 cyclin-dependent kinase 15 XM_006496049.3 70.2% 72.9% (many diffs)
18 mouse 271697 Cdk15 cyclin-dependent kinase 15 XR_373255.3 54.3% (many diffs)
19 mouse 271697 Cdk15 cyclin-dependent kinase 15 XM_011238531.1 46.8% 47.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1113
ORF length:
1047
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgac ttcatttcac cccaggggac ttcaagctgc ccgtgcccag aagttcaaga
121gtaaaaggcc acggagtaac agtgattgtt ttcaggaaga ggatctgagg cagggttttc
181agtggaggaa gagcctccct tttggggcag cctcatctta cttgaacttg gagaagctgg
241gtgaaggctc ttatgcgaca gtttacaagg ggattagcag aataaatgga caactagtgg
301ctttaaaagt catcagcatg aatgcagagg aaggagtccc atttacagct atccgagaag
361cttctctcct gaagggtttg aaacatgcca atattgtgct cctgcatgac ataatccaca
421ccaaagagac actgacattc gtttttgaat acatgcacac agacctggcc cagtatatgt
481ctcagcatcc aggagggctt catcctcata atgtcagact tttcatgttt caacttttgc
541ggggcctggc gtacatccac caccaacacg ttcttcacag ggacctgaaa cctcagaact
601tactcatcag tcacctggga gagctcaaac tggctgattt tggtcttgcc cgggccaagt
661ccattcccag ccagacatac tcttcagaag tcgtgaccct ctggtaccgg ccccctgatg
721ctttgctggg agccactgaa tattccTCTG AGCTGGACAT ATGGGGTGCA GGCTGCATCT
781TTATTGAAAT GTTCCAGGGT CAACCTTTGT TTCCTGGGGT TTCCAACATC CTTGAACAGC
841TGGAGAAAAT CTGGGAGGTG CTGGGAGTCC CTACAGAGGA TACTTGGCCG GGAGTCTCCA
901AGCTACCTAA CTACAATCCA GAATGGTTCC CACTGCCTAC GCCTCGAAGC CTTCATGTTG
961TCTGGAACAG GCTGGGCAGG GTTCCTGAAG CTGAAGACCT GGCCTCCCAG ATGCTAAAAG
1021GCTTTCCCAG AGACCGCGTC TCCGCCCAGG AAGCACTTGT TCATGATTAT TTCAGCGCCC
1081TGCCATCTCA GCTGTACCAG CTTCCTGATG AGTGCCCAAC TTTCTTGTAC AAAGTGGTTG
1141ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
1201GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGAAG
1261CAATTCTAAG CAATCTCCAA CGACGCGTTA AGTCgacaat caacctctgg attacaaaat
1321ttgtgaaaga tt

Download FASTA (ORF) (Full)