Construct: ORF TRCN0000481016

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006200.1_s317c1
Derived from:
ccsbBroadEn_01803
DNA Barcode:
CAGCGCAGAGCACTAAGCAGGTTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZBTB25 (7597)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481016
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001304507.1 100% 100%
2 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001354684.2 100% 100%
3 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001354685.2 100% 100%
4 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001354686.2 100% 100%
5 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001354687.1 100% 100%
6 human 7597 ZBTB25 zinc finger and BTB domain ... NM_006977.5 100% 100%
7 human 7597 ZBTB25 zinc finger and BTB domain ... XM_006720251.3 100% 100%
8 human 7597 ZBTB25 zinc finger and BTB domain ... XM_006720252.4 100% 100%
9 human 7597 ZBTB25 zinc finger and BTB domain ... XM_017021634.1 100% 100%
10 human 7597 ZBTB25 zinc finger and BTB domain ... XM_005268051.3 95.1% 95.1% 1_66del
11 human 7597 ZBTB25 zinc finger and BTB domain ... XM_017021631.1 95.1% 95.1% 1_66del
12 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001354682.2 91.7% 91.7% 1_117del
13 human 7597 ZBTB25 zinc finger and BTB domain ... XM_011537146.2 91.7% 91.7% 1_117del
14 human 7597 ZBTB25 zinc finger and BTB domain ... XM_017021630.2 77.6% 77.6% 1_375del
15 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001354683.2 72.9% 72.4% (many diffs)
16 human 7597 ZBTB25 zinc finger and BTB domain ... XM_006720250.4 67.1% 66.6% (many diffs)
17 human 7597 ZBTB25 zinc finger and BTB domain ... XM_017021636.1 66.9% 66.4% (many diffs)
18 human 7597 ZBTB25 zinc finger and BTB domain ... XM_011537141.3 56.6% 56.2% (many diffs)
19 human 7597 ZBTB25 zinc finger and BTB domain ... XR_943522.3 50.8% (many diffs)
20 human 7597 ZBTB25 zinc finger and BTB domain ... XM_017021638.2 47.4% 26.4% (many diffs)
21 human 7597 ZBTB25 zinc finger and BTB domain ... NM_001304508.1 16.6% 12.8% (many diffs)
22 mouse 109929 Zbtb25 zinc finger and BTB domain ... NM_001172104.1 89.3% 90.8% (many diffs)
23 mouse 109929 Zbtb25 zinc finger and BTB domain ... NM_028356.2 89.3% 90.8% (many diffs)
24 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515393.1 89.3% 90.8% (many diffs)
25 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515394.1 89.3% 90.8% (many diffs)
26 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515396.1 89.3% 90.8% (many diffs)
27 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515397.1 89.3% 90.8% (many diffs)
28 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515399.2 89.3% 90.8% (many diffs)
29 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515400.1 65.2% 65.3% (many diffs)
30 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_017314935.1 65.2% 65.3% (many diffs)
31 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515391.3 56.6% 57.6% (many diffs)
32 mouse 109929 Zbtb25 zinc finger and BTB domain ... XM_006515392.3 56.5% 53.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1371
ORF length:
1305
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga cactgccagc catagccttg ttcttctcca gcagctgaac atgcagcgag
121aatttggttt tctgtgtgat tgcacagttg caattggaga tgtttacttc aaagcccaca
181gagcagtgct tgctgctttt tctaactatt tcaagatgat atttattcac caaacaagtg
241aatgcataaa aatacaacca actgacatcc aacctgacat attcagctat ttgttgcaca
301ttatgtacac ggggaaaggg ccaaaacaga ttgtggatca tagtcgtttg gaggaaggga
361ttcgatttct tcacgccgac tacctttctc acattgcaac tgaaatgaat caagtgttct
421caccagagac tgtgcagtcc tcaaatttat atggcattca gatctcaaca acccaaaaaa
481cagttgtcaa acaaggactg gaggtcaaag aagctccttc cagtaacagt ggaaacagag
541ctgctgtcca gggtgaccac ccccagttgc agttgtctct tgctattggt ctggatgatg
601gcactgcaga ccagcagagg gcctgtcctg ccacccaggc cctggaggag caccagaagc
661ccccagtttc catcaagcag gagagatgtg acccagaatc tgtgatctcc cagagccacc
721cctcaccctc atcagaggtg acaggcccca cttttactga aaacagtgtc aaaatacact
781tatgccatta ctgtggggaa cgttttgatt cccgtagtaa cctaaggcaa catctccata
841cacatgtgtc tggatccctg ccattcggtg tccctgcttc cattctggaa agtaatgacc
901ttggtgaagt gcatcccctt aatgaaaaca gcgaggccct tgaatgccgc aggctcagct
961ccTTCATTGT TAAGGAGAAT GAACAGCAGC CAGACCACAC CAACCGGGGT ACCACAGAGC
1021CTTTGCAGAT CAGTCAAGTA TCTTTGATCT CCAAAGACAC AGAGCCAGTA GAATTAAACT
1081GTAATTTTTC TTTTTCAAGG AAAAGAAAAA TGAGCTGTAC CATCTGTGGT CATAAATTCC
1141CTCGAAAGAG CCAATTGTTG GAACACATGT ATACACACAA AGGTAAATCT TACAGATATA
1201ACCGATGCCA AAGGTTTGGT AATGCATTGG CCCAGAGATT TCAGCCATAC TGTGACAGCT
1261GGTCTGATGT CTCCCTGAAA AGTTCTCGCT TGTCACAAGA ACACTTAGAC TTGCCTTGTG
1321CCTTAGAGTC AGAGCTCACA CAAGAAAATG TGGATACTAT CCTAGTTGAG TACCCAACTT
1381TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1441CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1501CTTGTGGAAA GGACGACAGC GCAGAGCACT AAGCAGGTTG ACGCGTTAAG TCgacaatca
1561acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)