Construct: ORF TRCN0000487814

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019880.1_s317c1
DNA Barcode:
ACCAATCACTTAAGGCCTCATGAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADK (132)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000487814
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 132 ADK adenosine kinase NM_001123.3 99.8% 99.7% 156T>C;1035_1036insG
2 human 132 ADK adenosine kinase NM_006721.4 94.7% 93.9% (many diffs)
3 human 132 ADK adenosine kinase NM_001202449.1 94.5% 94.5% 89_90ins54;102T>C;981_982insG
4 human 132 ADK adenosine kinase XM_017015699.1 83.3% 76.6% (many diffs)
5 human 132 ADK adenosine kinase NM_001369124.1 83.3% 83.2% 156T>C;502_503ins171;864_865insG
6 human 132 ADK adenosine kinase XM_017015702.1 80.1% 68.8% 156T>C;709_710ins115;831_832ins90
7 human 132 ADK adenosine kinase XM_017015698.1 79.5% 75.6% (many diffs)
8 human 132 ADK adenosine kinase NM_001202450.1 79% 78.2% (many diffs)
9 human 132 ADK adenosine kinase XM_017015703.2 78.1% 78% 0_1ins225;810_811insG
10 human 132 ADK adenosine kinase NM_001369123.1 75.9% 64.5% (many diffs)
11 human 132 ADK adenosine kinase XM_017015706.1 65.7% 65% (many diffs)
12 human 132 ADK adenosine kinase XM_017015704.1 62.2% 60.8% (many diffs)
13 human 132 ADK adenosine kinase XM_017015705.1 60.2% 49.1% (many diffs)
14 mouse 11534 Adk adenosine kinase NM_001243041.1 89.1% 91% (many diffs)
15 mouse 11534 Adk adenosine kinase NM_134079.4 84.9% 86.1% (many diffs)
16 mouse 11534 Adk adenosine kinase XM_006518440.3 59% 56.3% (many diffs)
17 mouse 11534 Adk adenosine kinase XM_006518441.3 55.4% 56% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
1110
ORF length:
1038
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgacgtca gtcagagaaa atattctctt tggaatggga aatcctctgc
121ttgacatctc tgctgtagtg gacaaagatt tccttgataa gtattctctg aaaccaaatg
181accaaatctt ggctgaagac aaacacaagg aactgtttga tgaactcgtg aaaaaattca
241aagtcgaata tcatgctggt ggctctaccc agaattcaat taaagtggct cagtggatga
301ttcaacagcc acacaaagca gcaacatttt ttggatgcat tgggatagat aaatttgggg
361agatcctgaa gagaaaagct gctgaagccc atgtggatgc tcattactac gagcagaatg
421agcagccaac aggaacttgt gctgcatgca tcactggtga caacaggtcc ctcatagcta
481atcttgctgc tgccaattgt tataaaaagg aaaaacatct tgatctggag aaaaactgga
541tgttggtaga aaaagcaaga gtttgttata tagcaggctt ttttcttaca gtttccccag
601agtcagtatt aaaggtggct caccatgctt ctgaaaacaa caggattttc actttgaatc
661tatctgcacc gtttattagc cagttctaca aggaatcatt gatgaaagtt atgccttatg
721ttgatatact ttttggaaat gagacagaag ctgccacttt tgctagagag caaggctttg
781agactaaaga cattaaagag atagccaaaa agacacaagc cctgccaaag atgaactcaa
841agaggcagcg aatcgtgatc ttcacccaag ggagagatga cactataatg gctacagaaa
901gtgaagtCAC TGCTTTTGCT GTCTTGGATC AAGACCAGAA AGAAATTATT GATACCAATG
961GAGCTGGAGA TGCATTTGTT GGAGGTTTTC TGTCTCAACT GGTCTCTGAC AAGCCTCTGA
1021CTGAATGTAT CCGTGCTGGC CACTATGCAG CAAGCATCAT AATTAGACGG ACTGGCTGCA
1081CCTTTCCTGA GAAGCCAGAC TTCCACGACC CAGCTTTCTT GTACAAAGTG GTTGATATCG
1141GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
1201AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GAACCAATCA
1261CTTAAGGCCT CATGAGACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
1321aagatt

Download FASTA (ORF) (Full)