Construct: ORF TRCN0000487953

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019504.1_s317c1
DNA Barcode:
TCCTACCTGGTACCGTAATCTGCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PAK3 (5063)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000487953
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128166.2 100% 100%
2 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128167.2 100% 100%
3 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324325.2 100% 100%
4 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324326.2 100% 100%
5 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324330.2 100% 100%
6 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324331.2 100% 100%
7 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324332.2 100% 100%
8 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324334.2 100% 100%
9 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_002578.5 100% 100%
10 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029561.2 100% 100%
11 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128173.3 97.3% 97.3% 277_321del
12 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324327.2 97.3% 97.3% 277_321del
13 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324328.2 97.3% 97.3% 277_321del
14 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324329.2 97.3% 97.3% 277_321del
15 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001324333.2 97.3% 97.3% 277_321del
16 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029557.1 97.3% 97.3% 277_321del
17 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128172.2 96.2% 96.2% 277_339del
18 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_005262133.3 95.1% 93% (many diffs)
19 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029558.1 95.1% 93% (many diffs)
20 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029559.1 95.1% 93% (many diffs)
21 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029560.1 95.1% 93% (many diffs)
22 human 5063 PAK3 p21 (RAC1) activated kinase 3 NM_001128168.3 93.7% 93.7% 277_384del
23 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029563.1 93.7% 93.7% 277_384del
24 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_005262132.2 92.6% 90.5% (many diffs)
25 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_006724654.2 92.6% 90.5% (many diffs)
26 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_006724655.2 92.6% 90.5% (many diffs)
27 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530962.1 92.6% 90.5% (many diffs)
28 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530967.2 92.6% 90.5% (many diffs)
29 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530968.2 92.6% 90.5% (many diffs)
30 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530969.1 92.6% 90.5% (many diffs)
31 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_017029562.1 92.1% 92.1% (many diffs)
32 human 5063 PAK3 p21 (RAC1) activated kinase 3 XM_011530971.2 54.8% 49.2% (many diffs)
33 human 5063 PAK3 p21 (RAC1) activated kinase 3 NR_136748.1 18.4% 1_175del;1720_1832del;1921_8837del
34 human 5063 PAK3 p21 (RAC1) activated kinase 3 NR_136747.2 17.8% 1_429del;1972_2146del;2237_9153del
35 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195049.1 92.3% 98.5% (many diffs)
36 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_008778.3 92.3% 98.5% (many diffs)
37 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528753.3 92.3% 98.5% (many diffs)
38 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528754.3 92.3% 98.5% (many diffs)
39 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_011247790.2 92.3% 98.5% (many diffs)
40 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195048.1 89.8% 95.8% (many diffs)
41 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528752.3 89.8% 95.8% (many diffs)
42 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318423.1 89.8% 95.8% (many diffs)
43 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195047.1 88.9% 94.8% (many diffs)
44 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... NM_001195046.1 86.6% 92.4% (many diffs)
45 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_006528747.3 86.6% 92.4% (many diffs)
46 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318417.1 86.6% 92.4% (many diffs)
47 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318418.1 86.6% 92.4% (many diffs)
48 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318419.1 86.6% 92.4% (many diffs)
49 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318420.1 86.6% 92.4% (many diffs)
50 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318421.1 86.6% 92.4% (many diffs)
51 mouse 18481 Pak3 p21 protein (Cdc42/Rac)-act... XM_017318422.1 86.6% 92.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
90
ORF end:
1722
ORF length:
1632
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaatccg
61cggccgcccc cttcaccgga tccctgaaaa tgtctgacgg tctggataat gaagagaaac
121ccccggctcc tccactgagg atgaatagta acaaccggga ttcttcagca ctcaaccaca
181gctccaaacc acttcccatg gcccctgaag agaagaataa gaaagccagg cttcgctcta
241tcttcccagg aggaggggat aaaaccaata agaagaagga gaaagagcgc ccagagatct
301ctcttccttc agactttgag catacgattc atgtggggtt tgatgcagtc accggggaat
361tcactggaat tccagagcaa tgggcacgat tactccaaac ttccaacata acaaaattgg
421aacagaagaa gaacccacaa gctgttctag atgttctcaa attctatgat tccaaagaaa
481cagtcaacaa ccagaaatac atgagcttta catcaggaga taaaagtgca catggataca
541tagcagccca tccttcgagt acaaaaacag catctgagcc tccattggcc cctcctgtgt
601ctgaagaaga agatgaagag gaagaagaag aagaagatga aaatgagcca ccaccagtta
661tcgcaccaag accagagcat acaaaatcaa tctatactcg ttctgtggtt gaatccattg
721cttcaccagc agtaccaaat aaagaggtca caccaccctc tgctgaaaat gccaattcca
781gtactttgta caggaacaca gatcggcaaa gaaaaaaatc caagatgaca gatgaggaga
841tcttagagaa gctaagaagc attgtgagtg ttggggaccc aaagaaaaaa tacacaagat
901ttgaaaaaat tggtcaaggg gcatcaggta ctgtttatac agcactagac attgcaacag
961gacaagaggt ggccataaag cagatgaacc ttcaacagca acccaagaag gaattaatta
1021ttaatgaaat tctggtcatg agggaaaata agaaccctaa tattgttaat tatttagata
1081gctacttggt gggtgatgaa ctatgggtag tcatggaata cttggctggt ggctctctga
1141ctgatgtggt cacagagacc tgtatggatg aaggacagat agcagctgtc tgcagagagt
1201gcctgcaagc tttggatttc ctgcactcaa accaggtgat ccatagagat ataaagagtg
1261acaatattct tctcgggatg gatggctctg ttaaattgac tgactttggg ttctgtgccc
1321agatcactcc tgagcaaagt aaacgaagca ctatggtggg aaccccatat tggatggcac
1381ctgaggtggt gactcgaaaa gcttatggtc cgaaagttga tatctggtct cttGGAATTA
1441TGGCAATTGA AATGGTGGAA GGTGAACCCC CTTACCTTAA TGAAAATCCA CTCAGGGCAT
1501TGTATCTGAT AGCCACTAAT GGAACTCCAG AGCTCCAGAA TCCTGAGAGA CTGTCAGCTG
1561TATTCCGTGA CTTTTTAAAT CGCTGTCTTG AGATGGATGT GGATAGGCGA GGATCTGCCA
1621AGGAGCTTTT GCAGCATCCA TTTTTAAAAT TAGCCAAGCC TCTCTCCAGC CTGACTCCTC
1681TGATTATCGC TGCAAAGGAA GCAATTAAGA ACAGCAGCCG CAAGGGTGGG CGCGCCGACC
1741CAGCTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1801TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1861ATATATCTTG TGGAAAGGAC GATCCTACCT GGTACCGTAA TCTGCCACGC GTTAAGTCga
1921caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)