Construct: ORF TRCN0000488654

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019592.1_s317c1
DNA Barcode:
TTACAATCACTTAGGGAGTACATA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ENTPD1 (953)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488654
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 953 ENTPD1 ectonucleoside triphosphate... NM_001776.6 99.8% 99.8% 1529_1530delTA
2 human 953 ENTPD1 ectonucleoside triphosphate... NM_001098175.2 98.3% 97.6% (many diffs)
3 human 953 ENTPD1 ectonucleoside triphosphate... XM_011540371.2 98.3% 97.6% (many diffs)
4 human 953 ENTPD1 ectonucleoside triphosphate... NM_001164178.1 97.1% 96.5% (many diffs)
5 human 953 ENTPD1 ectonucleoside triphosphate... NM_001164179.2 91.8% 91.7% 810_811ins123;1406_1407delTA
6 human 953 ENTPD1 ectonucleoside triphosphate... XM_011540370.2 91.1% 85.1% (many diffs)
7 human 953 ENTPD1 ectonucleoside triphosphate... XM_017016958.2 89.6% 85.9% (many diffs)
8 human 953 ENTPD1 ectonucleoside triphosphate... NM_001320916.1 87.2% 83% (many diffs)
9 human 953 ENTPD1 ectonucleoside triphosphate... XM_011540372.2 81.4% 72.4% (many diffs)
10 human 953 ENTPD1 ectonucleoside triphosphate... XM_011540373.2 80.2% 72.3% (many diffs)
11 human 953 ENTPD1 ectonucleoside triphosphate... XM_011540374.3 79.7% 73.1% (many diffs)
12 human 953 ENTPD1 ectonucleoside triphosphate... NM_001164181.1 78.6% 78.6% 0_1ins324;1205_1206delTA
13 human 953 ENTPD1 ectonucleoside triphosphate... NM_001312654.1 78.6% 78.6% 0_1ins324;1205_1206delTA
14 human 953 ENTPD1 ectonucleoside triphosphate... XM_011540377.2 78.6% 78.6% 0_1ins324;1205_1206delTA
15 human 953 ENTPD1 ectonucleoside triphosphate... NM_001164182.2 72.8% 72.7% 0_1ins414;1115_1116delTA
16 human 953 ENTPD1 ectonucleoside triphosphate... NM_001164183.2 72.8% 72.7% 0_1ins414;1115_1116delTA
17 human 953 ENTPD1 ectonucleoside triphosphate... XM_017016959.1 72.8% 72.7% 0_1ins414;1115_1116delTA
18 human 953 ENTPD1 ectonucleoside triphosphate... XM_017016960.1 68.5% 65% (many diffs)
19 human 953 ENTPD1 ectonucleoside triphosphate... XM_011540376.2 67.4% 56.6% (many diffs)
20 human 953 ENTPD1 ectonucleoside triphosphate... XM_017016961.1 62.7% 59.2% (many diffs)
21 human 953 ENTPD1 ectonucleoside triphosphate... XM_017016964.2 53.9% 53.3% (many diffs)
22 human 953 ENTPD1 ectonucleoside triphosphate... XM_017016963.1 52.4% 51.1% (many diffs)
23 human 953 ENTPD1 ectonucleoside triphosphate... XM_017016962.1 47.7% 42.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
63
ORF end:
1593
ORF length:
1530
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaagcca
61ccatggaaga tacaaaggag tctaacgtga agacattttg ctccaagaat atcctagcca
121tccttggctt ctcctctatc atagctgtga tagctttgct tgctgtgggg ttgacccaga
181acaaagcatt gccagaaaac gttaagtatg ggattgtgct ggatgcgggt tcttctcaca
241caagtttata catctataag tggccagcag aaaaggagaa tgacacaggc gtggtgcatc
301aagtagaaga atgcagggtt aaaggtcctg gaatctcaaa atttgttcag aaagtaaatg
361aaataggcat ttacctgact gattgcatgg aaagagctag ggaagtgatt ccaaggtccc
421agcaccaaga gacacccgtt tacctgggag ccacggcagg catgcggttg ctcaggatgg
481aaagtgaaga gttggcagac agggttctgg atgtggtgga gaggagcctc agcaactacc
541cctttgactt ccagggtgcc aggatcatta ctggccaaga ggaaggtgcc tatggctgga
601ttactatcaa ctatctgctg ggcaaattca gtcagaaaac aaggtggttc agcatagtcc
661catatgaaac caataatcag gaaacctttg gagctttgga ccttggggga gcctctacac
721aagtcacttt tgtaccccaa aaccagacta tcgagtcccc agataatgct ctgcaatttc
781gcctctatgg caaggactac aatgtctaca cacatagctt cttgtgctat gggaaggatc
841aggcactctg gcagaaactg gccaaggaca ttcaggttgc aagtaatgaa attctcaggg
901acccatgctt tcatcctgga tataagaagg tagtgaacgt aagtgacctt tacaagaccc
961cctgcaccaa gagatttgag atgactcttc cattccagca gtttgaaatc cagggtattg
1021gaaactatca acaatgccat caaagcatcc tggagctctt caacaccagt tactgccctt
1081actcccagtg tgccttcaat gggattttct tgccaccact ccagggggat tttggggcat
1141tttcagcttt ttactttgtg atgaagtttt taaacttgac atcagagaaa gtctctcagg
1201aaaaggtgac tgagatgatg aaaaagttct gtgcTCAGCC TTGGGAGGAG ATAAAAACAT
1261CTTACGCTGG AGTAAAGGAG AAGTACCTGA GTGAATACTG CTTTTCTGGT ACCTACATTC
1321TCTCCCTCCT TCTGCAAGGC TATCATTTCA CAGCTGATTC CTGGGAGCAC ATCCATTTCA
1381TTGGCAAGAT CCAGGGCAGC GACGCCGGCT GGACTTTGGG CTACATGCTG AACCTGACCA
1441ACATGATCCC AGCTGAGCAA CCATTGTCCA CACCTCTCTC CCACTCCACC TATGTCTTCC
1501TCATGGTTCT ATTCTCCCTG GTCCTTTTCA CAGTGGCCAT CATAGGCTTG CTTATCTTTC
1561ACAAGCCTTC ATATTTCTGG AAAGATATGG ACCCAGCTTT CTTGTACAAA GTGGTTGATA
1621TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
1681CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGATTACA
1741ATCACTTAGG GAGTACATAA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
1801tgaaagatt

Download FASTA (ORF) (Full)