Construct: ORF ccsbBroad304_06242

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017323.1_s304c1, BRDN0000408549
Derived from:
ccsbBroadEn_06242
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GABRA6 (2559)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06242
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2559 GABRA6 gamma-aminobutyric acid typ... NM_000811.3 99.8% 100% 951G>T;1344C>G
2 mouse 14399 Gabra6 gamma-aminobutyric acid (GA... NM_001099641.2 86.6% 91.3% (many diffs)
3 mouse 14399 Gabra6 gamma-aminobutyric acid (GA... NM_008068.3 84.5% 89.1% (many diffs)
4 mouse 14399 Gabra6 gamma-aminobutyric acid (GA... XM_006532197.3 84.1% 89.6% (many diffs)
5 mouse 14399 Gabra6 gamma-aminobutyric acid (GA... XM_006532198.3 70.6% 74.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1428
ORF length:
1359
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgtcgtct ctgccctggc tgtgcattat tctgtggcta gaaaatgccc
121tagggaaact cgaagttgaa ggcaacttct actcagaaaa cgtcagtcgg atcctggaca
181acttgcttga aggctatgac aatcggctgc ggccgggatt tggaggtgct gtcactgaag
241tcaaaacaga catttatgtg accagttttg ggcccgtgtc agatgtggag atggagtata
301cgatggatgt ttttttccgc cagacctgga ctgatgagag gttgaagttt ggggggccaa
361ctgagattct gagtctgaat aatttgatgg tcagtaaaat ctggacgcct gacacctttt
421tcagaaatgg taaaaagtcc attgctcaca acatgacaac tcctaataaa ctcttcagaa
481taatgcagaa tggaaccatt ttatacacca tgaggcttac catcaatgct gactgtccca
541tgaggctggt taactttcct atggatgggc atgcttgtcc actcaagttt gggagctatg
601cttatcccaa aagtgaaatc atatatacgt ggaaaaaagg accactttac tcagtagaag
661tcccagaaga atcttcaagc cttctccagt atgatctgat tggacaaaca gtatctagtg
721agacaattaa atctaacaca ggtgaatacg ttataatgac agtttacttc cacttgcaaa
781ggaagatggg ctacttcatg atacagatat acactccttg cattatgaca gtcattcttt
841cccaggtgtc tttctggatt aataaggagt ccgtcccagc aagaactgtt tttgggatca
901ccactgtttt aactatgacc actttgagca tcagtgcccg gcactctttg ccaaaagtgt
961catatgccac tgccatggat tggttcatag ctgtttgctt tgcattcgtc ttctctgctc
1021ttatcgagtt cgcagctgtc aactacttta ccaatcttca gacacagaag gccaaaagga
1081aggcacagtt tgcagcccca cccacagtga caatatcaaa agctactgaa cctttggaag
1141ctgagattgt tttgcatcct gactccaaat atcatctgaa gaaaaggatc acttctctgt
1201ctttgccaat agtttcatct tccgaggcca ataaagtgct cacgagagcg cccatcttac
1261aatcaacacc tgtcacaccc ccaccactct cgccagcctt tggaggcacc agtaaaatag
1321accagtattc tcgaattctc ttcccagttg catttgcagg attcaacctt gtgtactggg
1381tagtttatct ttccaaagat acaatggaag tgagtagcag tgttgaattg ccaactttct
1441tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1501aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

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