Construct: ORF ccsbBroad304_08371

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011654.1_s304c1, BRDN0000403852
Derived from:
ccsbBroadEn_08371
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NLGN3 (54413)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08371
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54413 NLGN3 neuroligin 3 NM_018977.4 99.7% 99.5% (many diffs)
2 human 54413 NLGN3 neuroligin 3 NM_181303.2 97.3% 97.1% (many diffs)
3 human 54413 NLGN3 neuroligin 3 NM_001166660.1 97.3% 97.1% (many diffs)
4 human 54413 NLGN3 neuroligin 3 XM_006724662.4 88.3% 86.4% (many diffs)
5 human 54413 NLGN3 neuroligin 3 NM_001321276.2 85.6% 85.5% (many diffs)
6 human 54413 NLGN3 neuroligin 3 XM_006724663.4 83.6% 83.4% (many diffs)
7 human 54413 NLGN3 neuroligin 3 XM_011530974.3 83.6% 83.4% (many diffs)
8 human 54413 NLGN3 neuroligin 3 XM_017029597.2 65.2% 64.5% (many diffs)
9 mouse 245537 Nlgn3 neuroligin 3 NM_172932.4 92.7% 98.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2550
ORF length:
2484
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtg gctgcggctt ggcccgccct cgctgtccct gagccccaag cccacggttg
121gcaggagcct gtgcctcacc ctgtggttcc tcagtttggc gctgagggcc agtacccagg
181ccccagcacc cacagtcaac actcactttg ggaagctaag gggtgcccga gtaccactgc
241ccagtgagat cctggggcct gtggaccaat acctgggggt gccctacgca gctcccccga
301tcggcgagaa acgtttcctg ccccctgaac cacccccata ctggtcgggc atccggaacg
361ccacacactt tccaccagtg tgcccccaga acatccacac agctgtgccc gaagtcatgc
421tgccggtctg gttcactgcc aacttggata tcgtcgctac ttacatccag gagcccaacg
481aagactgtct ctacctgaac gtctatgtgc cgacggagga tggatccggc gctaagaaac
541agggcgagga cttagcggat aatgacgggg atgaagatga agacatccgg gacagtggtg
601ctaaacccgt catggtctac atccacggag gctcttacat ggaagggaca ggcaacatga
661ttgatggcag catcctcgcc agttatggca atgtcatcgt catcaccctc aactatcggg
721ttggagtgct aggtttcctg agtactggag atcaggctgc caagggcaac tatgggctcc
781ttgaccagat ccaggccctc cgctgggtga gcgagaatat tgccttcttc gggggagacc
841cccgccggat cactgtcttt ggctcgggca ttggtgcatc ctgcgtcagc ctcctaacgt
901tgtcacatca ctcagaggga cttttccaga gagccatcat ccaaagtggc tctgctctgt
961ccagctgggc tgtgaactac caaccagtga agtacaccag cctgctggca gacaaagtgg
1021gctgtaatgt gctggacacc gtggatatgg tggactgtct tcggcaaaag agtgccaagg
1081agctggtaga gcaggacatc cagccagccc gctaccacgt ggcctttggc cctgtgattg
1141atggtgatgt cattcctgat gaccctgaga tcctcatgga gcagggcgag ttcctcaact
1201atgacatcat gctaggtgtc aaccagggcg agggtctcaa gtttgtggaa ggggtggtgg
1261accctgagga tggtgtctct ggcactgact ttgactattc cgtctccaat tttgtggaca
1321atctgtatgg ctatcctgag ggtaaggaca ccctgcgaga gaccatcaag ttcatgtata
1381cagactgggc agaccgtgac aaccctgaga cccgccgtaa aacactggtg gcactcttca
1441ctgaccacca gtgggtggag ccctcagtgg tgacagccga tctgcatgcc cgctacggct
1501cgcctaccta cttctacgcc ttctatcatc actgccagag cctcatgaag cctgcttggt
1561cagatgcagc tcatggggat gaagtaccct atgtttttgg ggttcctatg gtaggcccca
1621ctgacctttt cccctgcaac ttctccaaga atgatgttat gctcagtgct gtcgtcatga
1681cctattggac caactttgcc aagactgggg atcccaacaa gccggtcccc caggacacca
1741agttcattca caccaaggcc aaccgctttg aggaagtggc ctggtccaaa tacaatcccc
1801gagaccagct ctaccttcac atcgggctga aaccaagggt ccgagatcat taccgggcca
1861ctaaggtggc cttttggaaa catctggtgc cgcacctata caacctgcat gacatgttcc
1921actatacgtc caccaccacc aaagtgccgc ctccggatac cacccacagc tcccacatca
1981cccgcaggcc caatggcaag acctggagca ccaagcggcc agccatctca cctgcctaca
2041gcaacgagaa tgcccagggg tcctggaacg gggaccagga tgcagggcca ctcctggtgg
2101agaaccctcg tgactactcc actgaattaa gtgtcaccat cgccgtgggg gcctccatcc
2161tgttccttaa cgttctggcc ttcgctgccc tctactaccg taaggacaaa cggcgccagg
2221agcccctgcg gcagcctagc cctcagcggg gagcctgggc cccggagttg ggagctgctc
2281cagaggagga gctggcagca ttacaactgg gccccaccca ccacgagtgt gaggccagtc
2341ccccccatga cacgctgcgc ctcactgcat tgcccgacta caccctgacc ctgcggcgct
2401ccccggatga catcccactc atgaccccca acaccatcac tatgatcccc aactccctgg
2461tagggctgca gacattgcac ccctataaca cctttgccgc agggttcaac agtaccgggc
2521tgccccactc acactccact acccgggtat acccaacttt cttgtacaaa gtggttggta
2581agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
2641ggtggcgcgt taagtcgaca atcaacctct ggatta

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