Construct: ORF ccsbBroad304_09191

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014458.1_s304c1, BRDN0000408677
Derived from:
ccsbBroadEn_09191
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ABLIM2 (84448)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09191
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84448 ABLIM2 actin binding LIM protein f... NM_032432.5 99.9% 100% 1080T>C
2 human 84448 ABLIM2 actin binding LIM protein f... XM_005248029.4 98.8% 98.4% (many diffs)
3 human 84448 ABLIM2 actin binding LIM protein f... XM_005248030.4 98.6% 98.2% (many diffs)
4 human 84448 ABLIM2 actin binding LIM protein f... XM_017008724.1 97.8% 97.9% 1044_1076del;1113T>C
5 human 84448 ABLIM2 actin binding LIM protein f... NM_001130087.2 97.6% 97.7% 1044_1076del;1113T>C;1252_1253insAGC
6 human 84448 ABLIM2 actin binding LIM protein f... XM_005248028.5 96.8% 96.4% (many diffs)
7 human 84448 ABLIM2 actin binding LIM protein f... XM_006713927.3 96.6% 96.2% (many diffs)
8 human 84448 ABLIM2 actin binding LIM protein f... NM_001130086.2 92.7% 92.6% 1080T>C;1219_1220insAGC;1361_1477del
9 human 84448 ABLIM2 actin binding LIM protein f... XM_017008722.1 92.6% 92.3% (many diffs)
10 human 84448 ABLIM2 actin binding LIM protein f... XM_017008721.1 92% 91.5% (many diffs)
11 human 84448 ABLIM2 actin binding LIM protein f... XM_005248027.4 91.8% 91.3% (many diffs)
12 human 84448 ABLIM2 actin binding LIM protein f... NM_001130085.2 90.6% 90.7% 1080T>C;1168_1323del;1375_1376insAGC
13 human 84448 ABLIM2 actin binding LIM protein f... XM_017008720.2 90.1% 89.5% (many diffs)
14 human 84448 ABLIM2 actin binding LIM protein f... XM_017008719.1 89.9% 89.6% (many diffs)
15 human 84448 ABLIM2 actin binding LIM protein f... XM_005248024.4 89.7% 89.4% (many diffs)
16 human 84448 ABLIM2 actin binding LIM protein f... XM_017008718.1 88.9% 89% (many diffs)
17 human 84448 ABLIM2 actin binding LIM protein f... XM_017008716.2 88.2% 87.9% (many diffs)
18 human 84448 ABLIM2 actin binding LIM protein f... XM_017008717.2 88.1% 87.7% (many diffs)
19 human 84448 ABLIM2 actin binding LIM protein f... XM_017008725.1 87.5% 87.1% (many diffs)
20 human 84448 ABLIM2 actin binding LIM protein f... XM_017008715.2 87.5% 87.1% (many diffs)
21 human 84448 ABLIM2 actin binding LIM protein f... XM_017008714.1 85.9% 85.9% 1080T>C;1168_1422del
22 human 84448 ABLIM2 actin binding LIM protein f... NM_001130088.2 85.7% 85.3% (many diffs)
23 human 84448 ABLIM2 actin binding LIM protein f... XM_017008713.1 85.1% 84.7% (many diffs)
24 human 84448 ABLIM2 actin binding LIM protein f... XM_005248023.4 84.9% 84.6% (many diffs)
25 human 84448 ABLIM2 actin binding LIM protein f... NM_001130084.2 84.9% 84.8% (many diffs)
26 human 84448 ABLIM2 actin binding LIM protein f... XM_005248031.4 84.7% 83.9% (many diffs)
27 human 84448 ABLIM2 actin binding LIM protein f... XM_017008711.1 84.1% 83.8% (many diffs)
28 human 84448 ABLIM2 actin binding LIM protein f... XM_005248022.4 84.1% 83.6% (many diffs)
29 human 84448 ABLIM2 actin binding LIM protein f... XM_005248021.5 83.6% 83.2% (many diffs)
30 human 84448 ABLIM2 actin binding LIM protein f... XM_006713925.3 83.4% 83.1% (many diffs)
31 human 84448 ABLIM2 actin binding LIM protein f... XM_017008710.2 82.6% 82.1% (many diffs)
32 human 84448 ABLIM2 actin binding LIM protein f... XM_017008709.1 82.5% 82.1% (many diffs)
33 human 84448 ABLIM2 actin binding LIM protein f... NM_001130083.2 80.7% 80.6% 1080T>C;1168_1422del;1619_1735del
34 human 84448 ABLIM2 actin binding LIM protein f... XM_005248019.4 80% 79.5% (many diffs)
35 human 84448 ABLIM2 actin binding LIM protein f... XM_017008708.1 79.8% 79.5% (many diffs)
36 human 84448 ABLIM2 actin binding LIM protein f... XM_005248020.4 79.8% 79.3% (many diffs)
37 human 84448 ABLIM2 actin binding LIM protein f... XM_017008707.1 79.2% 79.2% 1044_1076del;1113T>C;1199_1573del
38 human 84448 ABLIM2 actin binding LIM protein f... XM_005248018.5 78.6% 78.2% (many diffs)
39 human 84448 ABLIM2 actin binding LIM protein f... XM_005248017.4 78.5% 78.2% (many diffs)
40 human 84448 ABLIM2 actin binding LIM protein f... XM_006713924.4 78.5% 78% (many diffs)
41 human 84448 ABLIM2 actin binding LIM protein f... XM_006713923.4 78.3% 78% (many diffs)
42 human 84448 ABLIM2 actin binding LIM protein f... XM_005248014.5 74.1% 73.7% (many diffs)
43 human 84448 ABLIM2 actin binding LIM protein f... XM_017008706.1 74% 73.6% (many diffs)
44 human 84448 ABLIM2 actin binding LIM protein f... XM_017008723.1 73.9% 73.5% (many diffs)
45 human 84448 ABLIM2 actin binding LIM protein f... XM_011513586.3 67.4% 68.8% (many diffs)
46 human 84448 ABLIM2 actin binding LIM protein f... NM_001286688.2 47.1% 47% (many diffs)
47 human 84448 ABLIM2 actin binding LIM protein f... XM_024454256.1 45% 45% (many diffs)
48 human 84448 ABLIM2 actin binding LIM protein f... XM_017008727.1 44.8% 44.8% (many diffs)
49 human 84448 ABLIM2 actin binding LIM protein f... XM_017008726.1 42.1% 42% (many diffs)
50 human 84448 ABLIM2 actin binding LIM protein f... XR_925012.3 40.8% (many diffs)
51 human 84448 ABLIM2 actin binding LIM protein f... XR_925011.2 40.8% (many diffs)
52 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503924.1 86.7% 91.3% (many diffs)
53 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503923.1 85% 89.4% (many diffs)
54 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503922.1 80.7% 84.8% (many diffs)
55 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503921.1 79.2% 83.2% (many diffs)
56 mouse 231148 Ablim2 actin-binding LIM protein 2 NM_001177700.1 78.9% 83.1% (many diffs)
57 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_017320835.1 76.9% 80.9% (many diffs)
58 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503920.1 76.6% 80.5% (many diffs)
59 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_017320834.1 76.4% 80.4% (many diffs)
60 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_017320833.1 75% 78.9% (many diffs)
61 mouse 231148 Ablim2 actin-binding LIM protein 2 NM_001177699.1 74.6% 78.5% (many diffs)
62 mouse 231148 Ablim2 actin-binding LIM protein 2 NM_001177698.1 74.5% 78.4% (many diffs)
63 mouse 231148 Ablim2 actin-binding LIM protein 2 NM_177678.7 73.9% 77.6% (many diffs)
64 mouse 231148 Ablim2 actin-binding LIM protein 2 NM_001177697.1 73.3% 77.1% (many diffs)
65 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503918.1 73.1% 77% (many diffs)
66 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503917.1 71.1% 74.8% (many diffs)
67 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503916.1 70.1% 73.6% (many diffs)
68 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503915.1 69.3% 72.8% (many diffs)
69 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503913.1 68.8% 72.3% (many diffs)
70 mouse 231148 Ablim2 actin-binding LIM protein 2 NM_001177696.1 68.1% 71.5% (many diffs)
71 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503912.1 67% 70.4% (many diffs)
72 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503911.1 66.9% 70.4% (many diffs)
73 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503910.1 66.3% 69.6% (many diffs)
74 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503909.1 66% 69.3% (many diffs)
75 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503908.1 65% 68.2% (many diffs)
76 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503907.1 64.2% 67.5% (many diffs)
77 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503906.1 63.2% 66.4% (many diffs)
78 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503919.1 58.9% 61.2% (many diffs)
79 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_017320837.1 38.9% 41.1% (many diffs)
80 mouse 231148 Ablim2 actin-binding LIM protein 2 XM_006503926.3 34.5% 36.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1632
ORF length:
1563
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gagtgcagtg tcgcagcccc aggctgctcc cagcccgctg gagaagtcgc
121ccagcacggc gatcctgtgc aacacgtgtg ggaatgtgtg caagggcgag gtgctgcggg
181tgcaggacaa gtacttccac atcaagtgct tcgtctgtaa agcatgtggc tgcgacctgg
241ccgagggcgg cttcttcgtg cggcagggcg agtacatctg cacgctggac taccagaggc
301tctacggcac ccgctgcttc agctgcgacc agttcattga gggtgaggtg gtgtcggcgc
361tgggcaagac ctaccacccc gactgcttcg tgtgtgccgt ctgccggctg cccttccccc
421ccggggaccg agtgaccttc aacgggaagg aatgcatgtg ccagaagtgt tccctgcccg
481tatcggtggg cagcagcgcg cacctgtccc agggcctccg aagttgtggg ggctgcggca
541cagaaatcaa gaatggccag gccctggtag ccttggacaa gcactggcac ttgggctgtt
601ttaagtgcaa gagctgtggg aagctcctga atgccgagta catcagcaag gatgggctgc
661cctactgcga agctgactat cacgccaagt tcggcatccg ctgtgacagc tgtgagaaat
721acatcacggg gcgcgtgctg gaggccggag agaagcacta ccacccttcc tgcgcgctat
781gtgtcaggtg cggccagatg tttgcagaag gcgaagagat gtatcttcaa ggttcctcca
841tctggcatcc ggcgtgtcga caagcagcca gaactgaaga cagaaacaag gaaaccagaa
901cttcctcaga gagcatcatt tctgtccctg cttccagcac ctcagggtct ccgagccgtg
961tgatttatgc caagcttggt ggtgagatcc tggactacag ggacttggca gcccttccta
1021aaagtaaggc catctatgac atcgaccgcc ccgacatgat ctcctactca ccctacatca
1081gccactctgc aggggacagg cagagctacg gcgaggggga tcaggatgac cggtcctaca
1141agcagtgccg gacctccagc ccaagctcca ctgggtcggt tagcctcggg cgctacactc
1201cgacctcacg gtcaccacag cactacagcc gtccagctgc caggcgatcg gatggggagg
1261atggaagctt ggaccaggat aacaggaagc agaagagcag ctggctgatg ctcaaggggg
1321atgcagacac aaggaccaat tctccagacc tggacaccca gtccttgtcc cacagcagcg
1381ggaccgacag agaccctctc caaaggatgg caggggacag ctttcactca caatacaaga
1441tctatccgta tgactccctc atcgtcacaa accgaattcg cgtgaaactg cccaaagacg
1501tggaccggac gagactggag agacacttgt cgcccgagga gttccaggaa gtgtttggga
1561tgagcatcga ggagtttgac cgcctggccc tctggaagag gaatgacctt aagaagaaag
1621cccttttgtt cttgccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
1681tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
1741caatcaacct ctggatta

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