Construct: ORF ccsbBroad304_11307

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018043.1_s304c1, BRDN0000408601
Derived from:
ccsbBroadEn_11307
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IL1RL2 (8808)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11307
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8808 IL1RL2 interleukin 1 receptor like 2 NM_001351447.1 100% 100%
2 human 8808 IL1RL2 interleukin 1 receptor like 2 NM_001351448.1 94.7% 94.5% 298_299ins72
3 human 8808 IL1RL2 interleukin 1 receptor like 2 NM_001351449.2 91.8% 91% (many diffs)
4 human 8808 IL1RL2 interleukin 1 receptor like 2 NM_001351450.2 91.8% 91% (many diffs)
5 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_017005175.1 87.4% 86.4% (many diffs)
6 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_017005177.1 86.7% 85.1% (many diffs)
7 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_006712822.3 86.5% 84.7% (many diffs)
8 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_017005176.1 82.7% 81.4% (many diffs)
9 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_006712820.2 82.7% 80.5% (many diffs)
10 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_017005180.1 81.7% 79.8% (many diffs)
11 human 8808 IL1RL2 interleukin 1 receptor like 2 NM_001351446.1 75.4% 70.2% (many diffs)
12 human 8808 IL1RL2 interleukin 1 receptor like 2 NM_003854.4 75.4% 70.2% (many diffs)
13 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_017005174.2 73.1% 69.4% (many diffs)
14 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_011512091.1 72.4% 69.2% (many diffs)
15 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_011512092.1 72.4% 70.3% (many diffs)
16 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_011512094.1 71.8% 66% (many diffs)
17 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_011512093.1 68.5% 65.2% (many diffs)
18 human 8808 IL1RL2 interleukin 1 receptor like 2 XM_011512096.1 63.6% 60.3% (many diffs)
19 human 8808 IL1RL2 interleukin 1 receptor like 2 XR_923053.2 36.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1440
ORF length:
1371
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gacagggctc gtgtccctgt catattttcc actctccacg aggtcctgcg
121cgcttcaatc ctgcagcccg gtttggggat gtggtccttg ctgctctgcg ggttgtccat
181cgcccttcca ctgtctgtca cagcaggact gtaacgagat taaaggggag cggttcactg
241ttttggaaac caggcttttg gtgagcaatg tctcggcaga ggacagaggg aactacgcgt
301gtcaagccat actgacacac tcagggaagc agtacgaggt tttaaatggc atcactgtga
361gcattaaaag agctggatat ggaggaagtg tccctaaaat catttatcca aaaaatcatt
421caattgaagt acagcttggt accactctga ttgtggactg caatgtaaca gacaccaagg
481ataatacaaa tctacgatgc tggagagtca ataacacttt ggtggatgat tactatgatg
541aatccaaacg aatcagagaa ggggtggaaa cccatgtctc ttttcgggaa cataatttgt
601acacagtaaa catcaccttc ttggaagtga aaatggaaga ttatggcctt cctttcatgt
661gccacgctgg agtgtccaca gcatacatta tattacagct cccagctccg gattttcgag
721cttacttgat aggagggctt atcgccttgg tggctgtggc tgtgtctgtt gtgtacatat
781acaacatttt taagatcgac attgttcttt ggtatcgaag tgccttccat tctacagaga
841ccatagtaga tgggaagctg tatgacgcct atgtcttata ccccaagccc cacaaggaaa
901gccagaggca tgccgtggat gccctggtgt tgaatatcct gcccgaggtg ttggagagac
961aatgtggata taagttgttt atattcggca gagatgaatt ccctggacaa gccgtggcca
1021atgtcatcga tgaaaacgtt aagctgtgca ggaggctgat tgtcattgtg gtccccgaat
1081cgctgggctt tggcctgttg aagaacctgt cagaagaaca aatcgcggtc tacagtgccc
1141tgatccagga cgggatgaag gttattctca ttgagctgga gaaaatcgag gactacacag
1201tcatgccaga gtcaattcag tacatcaaac agaagcatgg tgccatccgg tggcatgggg
1261acttcacgga gcagtcacag tgtatgaaga ccaagttttg gaagacagtg agataccaca
1321tgccgcccag aaggtgtcgg ccgtttcctc cggtccagct gctgcagcac acaccttgct
1381accgcaccgc aggcccagaa ctaggctcaa gaagaaagaa gtgtactctc acgactggct
1441tgccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1501attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1561ggatta

Download FASTA (ORF) (Full)