Construct: ORF ccsbBroadEn_02313

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014282.1_s300c1, BRDN0000386977
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACTR3 (10096)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10096 ACTR3 actin related protein 3 NM_005721.5 100% 100%
2 human 10096 ACTR3 actin related protein 3 NM_001277140.1 87.7% 87.7% 0_1ins153
3 human 57180 ACTR3B actin related protein 3B NM_020445.6 76.8% 90.6% (many diffs)
4 human 10096 ACTR3 actin related protein 3 NR_102318.1 19.7% 1_346del;446_447ins125;1476_5583del
5 mouse 74117 Actr3 ARP3 actin-related protein 3 NM_001205385.1 93.4% 99.7% (many diffs)
6 mouse 74117 Actr3 ARP3 actin-related protein 3 NM_001205386.1 93.4% 99.7% (many diffs)
7 mouse 74117 Actr3 ARP3 actin-related protein 3 NM_023735.2 93.4% 99.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1320
ORF length:
1254
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGGACGGCTG CCGGCCTGTG TGGTGGACTG TGGCACGGGG TATACAAAAC
121TAGGATATGC TGGAAATACA GAACCACAGT TTATCATCCC TTCCTGTATT GCTATTAAGG
181AGTCAGCAAA AGTGGGTGAT CAAGCTCAAA GGAGGGTGAT GAAAGGTGTT GATGACCTAG
241ACTTCTTCAT TGGTGATGAA GCAATAGAAA AACCTACATA TGCAACAAAG TGGCCAATCC
301GCCATGGTAT AGTTGAAGAT TGGGACTTAA TGGAAAGGTT TATGGAGCAA GTGATCTTTA
361AATATTTAAG GGCAGAACCT GAAGACCATT ATTTTCTTTT GACTGAACCT CCATTGAATA
421CTCCAGAAAA CAGGGAATAT ACTGCTGAAA TAATGTTTGA GTCCTTCAAT GTTCCAGGCT
481TGTACATTGC TGTGCAGGCT GTTCTTGCCT TAGCTGCATC TTGGACCTCA AGACAAGTAG
541GAGAACGGAC GTTGACCGGT ACGGTAATAG ACAGTGGAGA TGGTGTCACT CATGTCATTC
601CTGTGGCTGA AGGGTATGTG ATTGGCAGCT GTATTAAACA CATTCCAATC GCAGGACGAG
661ATATAACATA TTTTATTCAG CAACTGCTGA GAGACCGAGA AGTAGGAATC CCTCCAGAAC
721AATCCTTGGA AACTGCTAAG GCAGTAAAGG AGCGCTATAG TTATGTCTGC CCAGATTTAG
781TAAAAGAATT TAACAAGTAT GATACAGATG GGTCAAAATG GATTAAACAG TATACTGGAA
841TCAATGCTAT CTCAAAGAAA GAGTTTTCTA TCGATGTTGG TTATGAGAGA TTTTTGGGAC
901CTGAAATCTT TTTTCATCCA GAGTTTGCTA ATCCAGACTT TACACAACCT ATCTCAGAAG
961TTGTAGATGA AGTAATTCAG AATTGTCCTA TTGATGTCAG ACGTCCTCTC TACAAGAATA
1021TTGTCCTCTC TGGAGGTTCA ACCATGTTCA GGGACTTTGG ACGTCGCTTG CAAAGAGATT
1081TGAAAAGAAC TGTAGATGCC CGGCTGAAAT TAAGTGAGGA ATTGAGTGGT GGTAGATTGA
1141AGCCAAAACC TATTGATGTA CAAGTCATTA CACACCACAT GCAGCGATAT GCAGTTTGGT
1201TTGGAGGATC AATGCTGGCT TCCACGCCTG AGTTCTACCA AGTATGCCAC ACCAAAAAGG
1261ATTATGAAGA AATTGGACCT AGCATTTGTC GTCACAATCC AGTGTTTGGA GTCATGTCGT
1321ACCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1381acgaac

Download FASTA (ORF) (Full)

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