Construct: ORF ccsbBroadEn_02757

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004016.1_s300c1, BRDN0000456648
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AHCYL2 (23382)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23382 AHCYL2 adenosylhomocysteinase like 2 NM_015328.4 100% 100%
2 human 23382 AHCYL2 adenosylhomocysteinase like 2 NM_001130720.3 99.8% 99.8% 361_362insAGC
3 human 23382 AHCYL2 adenosylhomocysteinase like 2 NM_001130723.3 81.7% 80.8% (many diffs)
4 human 23382 AHCYL2 adenosylhomocysteinase like 2 XM_005250237.1 81.7% 81% (many diffs)
5 human 23382 AHCYL2 adenosylhomocysteinase like 2 XM_011515987.2 81.7% 81% (many diffs)
6 human 23382 AHCYL2 adenosylhomocysteinase like 2 XM_011515988.2 81.7% 81% (many diffs)
7 human 23382 AHCYL2 adenosylhomocysteinase like 2 NM_001130722.3 81% 80.6% (many diffs)
8 human 23382 AHCYL2 adenosylhomocysteinase like 2 XM_017011904.1 66.1% 66.1% 0_1ins621
9 human 23382 AHCYL2 adenosylhomocysteinase like 2 XM_017011905.2 66.1% 66.1% 0_1ins621
10 human 23382 AHCYL2 adenosylhomocysteinase like 2 XM_017011906.1 66.1% 66.1% 0_1ins621
11 human 23382 AHCYL2 adenosylhomocysteinase like 2 XM_017011907.1 66.1% 66.1% 0_1ins621
12 human 10768 AHCYL1 adenosylhomocysteinase like 1 NM_001242675.2 62.5% 73.3% (many diffs)
13 human 10768 AHCYL1 adenosylhomocysteinase like 1 NM_001242676.2 62.5% 73.3% (many diffs)
14 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... NM_021414.6 92.1% 98.8% (many diffs)
15 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... NM_001171000.2 91.9% 98.6% (many diffs)
16 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... NM_001347084.1 75.9% 80.8% (many diffs)
17 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... XM_006505182.2 75.9% 81% (many diffs)
18 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... XM_006505181.3 75.6% 78.3% (many diffs)
19 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... XM_006505179.2 75.5% 79.1% (many diffs)
20 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... NM_001171001.1 75.5% 80.6% (many diffs)
21 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... XM_006505183.3 75.4% 80.5% (many diffs)
22 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... XM_006505180.2 75.3% 80.3% (many diffs)
23 mouse 74340 Ahcyl2 S-adenosylhomocysteine hydr... XM_011241082.2 70.8% 74.3% (many diffs)
24 mouse 229709 Ahcyl1 S-adenosylhomocysteine hydr... XM_006501408.3 63.5% 73.3% (many diffs)
25 mouse 229709 Ahcyl1 S-adenosylhomocysteine hydr... XM_017319556.1 41.7% 48.6% (many diffs)
26 mouse 229709 Ahcyl1 S-adenosylhomocysteine hydr... XM_017319557.1 41.7% 48.6% (many diffs)
27 mouse 229709 Ahcyl1 S-adenosylhomocysteine hydr... XM_017319558.1 38.3% 42.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1899
ORF length:
1833
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC GGTGCAGGTT GTGTCAGCCG CGGCTGCCGC CAAGGTGCCT GAGGTGGAGC
121TGAAGGACCT GAGCCCCTCC GAGGCGGAGT CGCAACTAGG ACTGAGCACG GCCGCCGTGG
181GCGCCATGGC CCCCCCGGCG GGCGGTGGAG ACCCTGAGGC TCCAGCTCCC GCCGCGGAGC
241GGCCCCCGGT CCCCGGCCCG GGCTCGGGGC CCGCCGCCGC TCTCAGCCCC GCCGCCGGGA
301AGGTGCCTCA GGCGTCGGCC ATGAAGCGGA GCGACCCACA TCACCAGCAC CAGCGGCACC
361GCGACGGCGG CGAGGCCCTG GTCAGCCCCG ACGGCACCGT CACCGAGGCG CCGCGCACAG
421TCAAGAAGCA GATCCAGTTT GCTGACCAGA AGCAAGAATT CAACAAACGT CCCACCAAAA
481TTGGACGTCG CTCTTTGTCT CGTTCCATTT CTCAGTCATC TACTGACAGC TACAGCTCAG
541CGGCTTCATA TACAGATAGC TCTGATGATG AGACATCGCC CAGGGACAAG CAGCAAAAGA
601ACTCTAAGGG AAGCAGTGAC TTCTGTGTTA AGAACATCAA ACAGGCAGAG TTTGGACGAA
661GAGAAATTGA AATTGCTGAA CAAGAAATGC CTGCATTGAT GGCTTTGAGG AAGAGAGCTC
721AAGGAGAAAA GCCTTTGGCT GGAGCCAAAA TCGTGGGTTG CACACACATC ACTGCTCAGA
781CTGCTGTGCT TATGGAAACT CTGGGTGCTC TGGGGGCCCA GTGCCGATGG GCTGCCTGCA
841ACATCTATTC CACTCTCAAT GAAGTGGCTG CTGCTCTAGC AGAAAGTGGA TTTCCTGTTT
901TTGCCTGGAA GGGAGAGTCA GAAGATGACT TTTGGTGGTG TATCGATAGA TGTGTGAATG
961TGGAGGGCTG GCAGCCAAAC ATGATCTTGG ATGATGGAGG GGATCTTACC CACTGGATTT
1021ATAAAAAGTA TCCCAACATG TTTAAGAAAA TCAAGGGCAT AGTAGAGGAG AGTGTTACTG
1081GAGTTCACAG GCTGTACCAA CTGTCCAAAG CTGGGAAGCT GTGTGTTCCA GCCATGAATG
1141TCAATGACTC AGTCACCAAA CAGAAATTTG ACAACCTCTA CTGTTGCCGT GAATCAATTC
1201TTGATGGACT TAAAAGGACA ACAGACATGA TGTTTGGTGG AAAGCAAGTG GTAGTCTGTG
1261GCTATGGAGA GGTGGGGAAA GGGTGCTGTG CTGCCCTGAA AGCCATGGGC TCCATTGTGT
1321ATGTAACTGA AATTGACCCC ATCTGTGCCC TGCAAGCCTG TATGGATGGA TTTCGACTGG
1381TGAAATTAAA TGAGGTCATC CGACAAGTGG ACATTGTTAT TACCTGTACA GGTAACAAGA
1441ATGTGGTAAC CAGAGAGCAC TTGGACCGTA TGAAGAATAG CTGCATCGTT TGTAACATGG
1501GACATTCCAA CACAGAGATT GACGTGGCGA GTCTGCGGAC ACCAGAACTG ACCTGGGAGC
1561GAGTGAGATC TCAAGTTGAC CATGTGATAT GGCCTGATGG CAAGAGGATA GTACTGCTGG
1621CAGAGGGCCG CCTGCTGAAC CTTAGCTGCT CCACAGTGCC TACATTTGTG CTCTCAATCA
1681CTGCTACTAC TCAGGCTCTT GCCTTGATAG AGCTTTACAA TGCTCCTGAG GGTCGCTATA
1741AGCAGGATGT CTACCTGTTG CCCAAGAAGA TGGATGAGTA TGTGGCCAGC CTACACCTGC
1801CTACCTTTGA TGCCCACTTG ACAGAGCTGA CAGATGAACA GGCCAAGTAT CTGGGACTCA
1861ACAAGAATGG GCCCTTCAAG CCTAATTACT ACAGGTATTA CCCAACTTNC TTGTACAAAG
1921TTGGcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.