Construct: ORF ccsbBroadEn_07155

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010213.1_s300c1, BRDN0000387120
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF26 (7574)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7574 ZNF26 zinc finger protein 26 NM_019591.4 99.8% 100% 1119T>C;1515C>T
2 human 7574 ZNF26 zinc finger protein 26 XM_017019921.1 97% 96.1% (many diffs)
3 human 7574 ZNF26 zinc finger protein 26 NM_001330513.2 96.1% 96.2% 0_1ins60;1059T>C;1455C>T
4 human 7574 ZNF26 zinc finger protein 26 NM_001330514.2 96.1% 96.2% 0_1ins60;1059T>C;1455C>T
5 human 7574 ZNF26 zinc finger protein 26 XM_005266183.3 96.1% 96.2% 0_1ins60;1059T>C;1455C>T
6 human 7574 ZNF26 zinc finger protein 26 XM_017019922.1 96.1% 96.2% 0_1ins60;1059T>C;1455C>T
7 human 7574 ZNF26 zinc finger protein 26 XM_017019923.1 96.1% 96.2% 0_1ins60;1059T>C;1455C>T
8 human 7574 ZNF26 zinc finger protein 26 NM_001256279.2 94% 94.1% 33_131del;1218T>C;1614C>T
9 human 7574 ZNF26 zinc finger protein 26 NM_001256280.2 93.8% 93.9% 159_160ins96;1023T>C;1419C>T
10 human 7574 ZNF26 zinc finger protein 26 XM_017019920.1 92.1% 91.3% (many diffs)
11 human 7574 ZNF26 zinc finger protein 26 XR_001748865.1 29.1% (many diffs)
12 human 7574 ZNF26 zinc finger protein 26 XR_001748866.2 27.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1665
ORF length:
1599
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CACCAGTTTC CGGACAGCTT CGTGCTGGGG ATTATTGTCA TTCAAGGATA
121TATCTATGGA GTTCACCTGG GATGAATGGC AGCTACTGGA TTCTACACAG AAGTACCTGT
181ACAGAGATGT GATATTGGAA AACTATCATA ACCTGATATC AGTGGGGTAT CATGGTACCA
241AGCCTGACTT AATCTTCAAG TTGGAACAAG GAGAAGATCC ATGGATAATA AATGCCAAAA
301TTTCCAGGCA GAGCTGTCCA GATGGCTGGG AAGAATGGTA CCAGAACAAT CAAGATGAGC
361TTGAGAGTAT TGAAAGAAGC TATGCTTGTA GTGTGTTGGG AAGACTTAAT CTGAGCAAAA
421CCCATGATTC TTCAAGACAG AGACTCTATA ACACACGTGG AAAAAGTTTG ACACAAAACT
481CAGCTCCAAG CAGAAGTTAT TTAAGAAAGA ATCCTGATAA GTTTCATGGT TATGAAGAAC
541CATATTTTCT TAAGCATCAA AGAGCTCATA GCATAGAAAA AAACTGTGTG TGTAGTGAAT
601GTGGGAAAGC TTTTCGTTGT AAGTCACAGC TCATTGTACA TCTCAGAATT CATACAGGAG
661AGAGACCTTA TGAATGCAGT AAATGTGAAA GAGCCTTCAG TGCCAAGTCA AACCTTAATG
721CTCATCAGAG AGTTCATACA GGAGAAAAAC CCTACTCATG TAGTGAGTGC GAGAAGGTCT
781TCTCTTTCAG GTCACAGCTC ATTGTCCATC AGGAAATTCA CACAGGAGGG AAACCCTATG
841GCTGCAGTGA ATGTGGGAAA GCCTACAGTT GGAAATCACA GCTTCTTTTA CACCAGAGAA
901GTCACACAGG AGTGAAACCG TATGAATGCA GCGAATGTGG GAAAGCCTTT AGTTTGAAGT
961CTCCATTCGT TGTACACCAG AGAACTCATA CAGGAGTGAA ACCCCATAAA TGCAGTGAAT
1021GTGGGAAAGC CTTTAGGAGT AAGTCCTATC TCCTTGTTCA CATCCGAATG CATACAGGAG
1081AAAAACCCTA TCAATGCAGT GATTGTGGGA AAGCCTTCAA TATGAAGACA CAACTCATTG
1141TACATCAGGG AGTTCACACA GGAAATAATC CTTATCAATG CGGCGAATGT GGGAAAGCCT
1201TTGGTAGGAA GGAACAGCTC ACTGCACATC TGAGAGCTCA TGCAGGAGAG AAGCCCTATG
1261GATGCAGTGA ATGTGGGAAG GCTTTCAGCA GCAAGTCATA CCTTGTTATA CATAGGAGAA
1321CACACACCGG AGAGAGACCC TATGAATGTA GTTTGTGTGA GAGAGCCTTT TGTGGAAAAT
1381CACAGCTGAT TATACATCAG AGAACTCATT CAACTGAGAA GCCCTATGAA TGCAATGAAT
1441GTGAAAAAGC CTACCCTAGG AAGGCATCAC TTCAGATACA CCAGAAAACT CATTCGGGAG
1501AGAAACCTTT TAAATGCAGT GAATGTGGAA AAGCCTTCAC TCAGAAGTCA TCTCTCAGTG
1561AACATCAGAG AGTTCACACT GGAGAGAAAC CATGGAAATG CTCTGAATGT GGGAAATCCT
1621TCTGTTGGAA TTCAGGGCTT CGTATACATC GGAAGACTCA TAAATGCCCA ACTTTCTTGT
1681ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)