Construct: ORF ccsbBroadEn_11434

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014365.1_s300c1, BRDN0000393768
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGAP25 (9938)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9938 ARHGAP25 Rho GTPase activating prote... NM_001166276.2 68.5% 63.8% (many diffs)
2 human 9938 ARHGAP25 Rho GTPase activating prote... NM_014882.3 68.3% 63.6% (many diffs)
3 human 9938 ARHGAP25 Rho GTPase activating prote... XM_017005423.2 66.8% 61.5% (many diffs)
4 human 9938 ARHGAP25 Rho GTPase activating prote... XM_017005424.1 66.7% 61.3% (many diffs)
5 human 9938 ARHGAP25 Rho GTPase activating prote... NM_001007231.3 66.5% 61.3% (many diffs)
6 human 9938 ARHGAP25 Rho GTPase activating prote... NM_001364819.1 66.3% 61.1% (many diffs)
7 human 9938 ARHGAP25 Rho GTPase activating prote... NM_001364821.1 65.5% 60.8% (many diffs)
8 human 9938 ARHGAP25 Rho GTPase activating prote... XM_011533207.3 65.5% 60.8% (many diffs)
9 human 9938 ARHGAP25 Rho GTPase activating prote... XM_011533208.2 65.5% 60.8% (many diffs)
10 human 9938 ARHGAP25 Rho GTPase activating prote... XM_017005425.1 60.8% 55.5% (many diffs)
11 human 9938 ARHGAP25 Rho GTPase activating prote... NM_001364820.1 60.5% 55.3% (many diffs)
12 human 9938 ARHGAP25 Rho GTPase activating prote... NM_001166277.2 60.4% 55.1% (many diffs)
13 human 9938 ARHGAP25 Rho GTPase activating prote... XM_017005428.1 59.6% 55.4% (many diffs)
14 human 9938 ARHGAP25 Rho GTPase activating prote... XM_011533209.2 48.7% 41.4% (many diffs)
15 human 9938 ARHGAP25 Rho GTPase activating prote... XM_011533210.3 26.8% 22% (many diffs)
16 human 9938 ARHGAP25 Rho GTPase activating prote... XM_017005426.1 26.8% 22% (many diffs)
17 human 9938 ARHGAP25 Rho GTPase activating prote... XM_017005427.1 26.8% 22% (many diffs)
18 mouse 232201 Arhgap25 Rho GTPase activating prote... NM_001037727.2 56.6% 56.2% (many diffs)
19 mouse 232201 Arhgap25 Rho GTPase activating prote... NM_175476.4 55.3% 55.7% (many diffs)
20 mouse 232201 Arhgap25 Rho GTPase activating prote... NM_001286610.1 47% 46.7% (many diffs)
21 mouse 232201 Arhgap25 Rho GTPase activating prote... XM_017321530.1 43.9% 43.8% (many diffs)
22 mouse 232201 Arhgap25 Rho GTPase activating prote... NR_104483.1 29.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1440
ORF length:
1374
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC CCTCGGTCAG TCGGCCTGTC TGTTCCTCTC TATAGCTCGG TCAAGGAGTG
121TGATGACTGG CGAGCAGATG GCTGCCTTCC ATCCATCGTC CACCCCCAAC CCGCTGGAGA
181GGCCCATCAA GATGGGCTGG CTGAAGAAGC AGAGGTCCAT CGTGAAGAAC TGGCAGCAGA
241GGTACTTTGT GCTGAGGGCG CAGCAGCTCT ACTACTACAA GGATGAAGAG GACACGAAGC
301CCCAGGGCTG CATGTATCTA CCAGGATGTA CAATCAAGGA GATCGCCACA AACCCAGAAG
361AAGCTGGGAA GTTTGTCTTT GAAATCATTC CAGCCTCATG GGACCAGAAT CGCATGGGAC
421AGGACTCCTA TGTCCTCATG GCCAGCTCTC AGGCGGAGAT GGAGGAGTGG GTTAAATTCC
481TCAGGAGAGT TGCTGGCACA CCCTGTGGAG CAGTGTTTGG CCAGCGCTTG GATGAGACTG
541TGGCCTATGA ACAGAAATTC GGCCCCCATC TGGTGCCCAT CCTGGTGGAG AAATGTGCAG
601AGTTCATCCT GGAGCACGGC CGGAATGAAG AGGGCATCTT CCGTCTGCCT GGGCAGGACA
661ACCTGGTGAA GCAGCTGAGA GACGCTTTTG ATGCTGGGGA GCGGCCCTCC TTTGACAGAG
721ACACAGATGT GCACACTGTG GCTTCCCTGT TAAAGCTCTA CCTCCGAGAC CTCCCAGAGC
781CCGTGGTTCC CTGGAGCCAG TACGAAGGGT TCCTGCTCTG TGGGCAGCTC ACGAATGCGG
841ATGAGGCAAA GGCTCAGCAG GAGTTGATGA AGCAGCTCTC CATCCTTCCT CGTGACAACT
901ATAGTCTCCT GAGCTACATC TGCAGGTTCC TACATGAAAT ACAGCTGAAC TGTGCTGTTA
961ACAAGATGAG TGTGGACAAC CTGGCTACTG TGATTGGTGT GAATCTCATC AGGTCGAAGG
1021TCGAAGACCC TGCCGTGATC ATGAGAGGGA CTCCTCAGAT CCAAAGAGTG ATGACTATGA
1081TGATCAGAGA CCATGAAGTC CTCTTCCCCA AGTCCAAGGA TATACCCCTG TCACCCCCTG
1141CCCAGAAAAA TGACCCCAAG AAAGCTCCAG TGGCCCGAAG CTCTGTAGGC TGGGATGCCA
1201CTGAAGACCT CCGAATTTCT AGGACAGACA GCTTCAGTAG CATGGTAAGG TGCAGAGAAC
1261CTTCCTGCTT CCATTGGGTT CTTCCTTTAG TCCAGGCCAT CCCATGTAAG GCCTGCTCTC
1321GGGTGGCAAT TTGGGGAGTT TTAGGTGATG CAGTGGCAGT GGGCGCTGCT GCTACAGACT
1381CATCTGAACA CACCTTGAAA GCCTGGCCTC TTTCCAAATC TAGTTTCTAT TGGCATCTTT
1441GCCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1501acgaac

Download FASTA (ORF) (Full)