Construct: ORF ccsbBroadEn_14563

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002810.1_s300c1, BRDN0000386404
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CAMK2B (816)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 816 CAMK2B calcium/calmodulin dependen... NM_172081.3 100% 100%
2 human 816 CAMK2B calcium/calmodulin dependen... XM_017012664.1 99.8% 99.8% 943_944insCAG
3 human 816 CAMK2B calcium/calmodulin dependen... NM_172079.2 97.1% 97.1% 1059_1103del
4 human 816 CAMK2B calcium/calmodulin dependen... NM_172080.3 96.9% 96.9% 943_944insCAG;1056_1100del
5 human 816 CAMK2B calcium/calmodulin dependen... XM_005249864.3 96.7% 95.8% (many diffs)
6 human 816 CAMK2B calcium/calmodulin dependen... XM_017012665.1 96.5% 95.6% (many diffs)
7 human 816 CAMK2B calcium/calmodulin dependen... XM_005249862.3 95.3% 95.2% 947_1019delinsC
8 human 816 CAMK2B calcium/calmodulin dependen... NM_172083.3 95.2% 95.2% 986_987ins72
9 human 816 CAMK2B calcium/calmodulin dependen... NM_001293170.2 92.7% 92.6% 947_1019delinsC;1131_1175del
10 human 816 CAMK2B calcium/calmodulin dependen... NM_172078.3 92.7% 92.6% 947_1019delinsC;1131_1175del
11 human 816 CAMK2B calcium/calmodulin dependen... XM_006715784.2 92.2% 91.2% (many diffs)
12 human 816 CAMK2B calcium/calmodulin dependen... NM_172084.3 89.2% 89.2% 944_945ins162
13 human 816 CAMK2B calcium/calmodulin dependen... NM_172082.3 87.3% 86.3% (many diffs)
14 human 816 CAMK2B calcium/calmodulin dependen... XM_017012662.1 83.1% 83.1% 943_944insCAG;1056_1100del;1151_1408del
15 human 816 CAMK2B calcium/calmodulin dependen... XM_006715781.2 80% 80% 943_944insCAG;1106_1477del
16 human 816 CAMK2B calcium/calmodulin dependen... XM_024446945.1 80% 79.9% 947_1019delinsC;1131_1175del;1226_1483del
17 human 818 CAMK2G calcium/calmodulin dependen... NM_172173.3 79.4% 87.7% (many diffs)
18 human 818 CAMK2G calcium/calmodulin dependen... NM_001367530.1 78.7% 87% (many diffs)
19 human 818 CAMK2G calcium/calmodulin dependen... NM_001222.4 78.1% 87.9% (many diffs)
20 human 818 CAMK2G calcium/calmodulin dependen... XM_017016730.1 77.9% 85.5% (many diffs)
21 human 818 CAMK2G calcium/calmodulin dependen... NM_001367517.1 77.8% 86.1% (many diffs)
22 human 818 CAMK2G calcium/calmodulin dependen... NM_172170.5 77.8% 86.1% (many diffs)
23 human 816 CAMK2B calcium/calmodulin dependen... XM_017012661.1 76.6% 76.5% 947_1019delinsC;1179_1565del
24 human 818 CAMK2G calcium/calmodulin dependen... NM_001367532.1 76.5% 84.5% (many diffs)
25 human 818 CAMK2G calcium/calmodulin dependen... NM_001367531.1 76.4% 83.9% (many diffs)
26 human 815 CAMK2A calcium/calmodulin dependen... NM_001369025.2 76.3% 81.1% (many diffs)
27 human 815 CAMK2A calcium/calmodulin dependen... NM_001363990.1 76.2% 81.1% (many diffs)
28 human 815 CAMK2A calcium/calmodulin dependen... NM_171825.2 76.2% 81.1% (many diffs)
29 human 818 CAMK2G calcium/calmodulin dependen... NM_001367516.1 76% 81% (many diffs)
30 human 818 CAMK2G calcium/calmodulin dependen... NM_001367545.1 75.7% 81.9% (many diffs)
31 human 818 CAMK2G calcium/calmodulin dependen... NM_172169.3 75.6% 83.5% (many diffs)
32 human 818 CAMK2G calcium/calmodulin dependen... NM_001367536.1 75.4% 82.4% (many diffs)
33 human 816 CAMK2B calcium/calmodulin dependen... NM_001220.5 75.4% 75.3% 947_1019delinsC;1131_1175del;1226_1597del
34 human 816 CAMK2B calcium/calmodulin dependen... XM_011515555.1 75.4% 75.3% 947_1019delinsC;1131_1175del;1224_1595del
35 human 816 CAMK2B calcium/calmodulin dependen... XM_011515556.1 75.2% 71.9% (many diffs)
36 human 816 CAMK2B calcium/calmodulin dependen... XM_017012660.1 75% 75% 1107_1607del
37 human 816 CAMK2B calcium/calmodulin dependen... XM_011515557.1 75% 71.8% (many diffs)
38 human 818 CAMK2G calcium/calmodulin dependen... XM_005270205.1 75% 84.4% (many diffs)
39 human 818 CAMK2G calcium/calmodulin dependen... XM_006717998.1 74.9% 82.2% (many diffs)
40 human 816 CAMK2B calcium/calmodulin dependen... XM_011515554.1 74.9% 74.9% 943_944insCAG;1104_1604del
41 human 816 CAMK2B calcium/calmodulin dependen... XM_011515553.1 74.9% 74.8% 947_1019delinsC;1131_1175del;1224_1610del
42 human 818 CAMK2G calcium/calmodulin dependen... NM_001204492.1 74.8% 82.7% (many diffs)
43 human 818 CAMK2G calcium/calmodulin dependen... XM_024448218.1 74.3% 82% (many diffs)
44 human 816 CAMK2B calcium/calmodulin dependen... XM_017012670.2 74.3% 74.3% 0_1ins387
45 human 818 CAMK2G calcium/calmodulin dependen... NM_001367518.1 74.3% 81.1% (many diffs)
46 human 818 CAMK2G calcium/calmodulin dependen... NM_001367533.1 74% 81.8% (many diffs)
47 human 818 CAMK2G calcium/calmodulin dependen... NM_001367543.1 73.5% 80.7% (many diffs)
48 human 816 CAMK2B calcium/calmodulin dependen... XM_011515550.1 73.4% 73.4% 1059_1103del;1152_1652del
49 human 816 CAMK2B calcium/calmodulin dependen... XM_011515552.1 73.2% 73.2% 943_944insCAG;1056_1100del;1149_1649del
50 human 816 CAMK2B calcium/calmodulin dependen... XM_011515558.2 73% 61.3% (many diffs)
51 human 818 CAMK2G calcium/calmodulin dependen... NM_001367527.1 72.8% 78.9% (many diffs)
52 human 818 CAMK2G calcium/calmodulin dependen... NM_172171.2 72.7% 80.4% (many diffs)
53 human 816 CAMK2B calcium/calmodulin dependen... XM_011515551.1 72.5% 69.3% (many diffs)
54 human 816 CAMK2B calcium/calmodulin dependen... XM_011515549.1 72.4% 72.3% 947_1019delinsC;1179_1679del
55 human 816 CAMK2B calcium/calmodulin dependen... XM_017012668.2 72.2% 72.2% 0_1ins387;672_716del
56 human 816 CAMK2B calcium/calmodulin dependen... XM_024446946.1 72% 72% 0_1ins387;556_557insCAG;669_713del
57 human 818 CAMK2G calcium/calmodulin dependen... NM_001367547.1 71.8% 78.9% (many diffs)
58 human 818 CAMK2G calcium/calmodulin dependen... NM_001367546.1 71.5% 78.1% (many diffs)
59 human 818 CAMK2G calcium/calmodulin dependen... NM_001367525.1 71.5% 78.9% (many diffs)
60 human 818 CAMK2G calcium/calmodulin dependen... XM_006717996.1 71.5% 78.5% (many diffs)
61 human 818 CAMK2G calcium/calmodulin dependen... XM_005270198.1 71.3% 78.8% (many diffs)
62 human 816 CAMK2B calcium/calmodulin dependen... XM_017012667.2 70.9% 70.7% 0_1ins387;560_632delinsC
63 human 816 CAMK2B calcium/calmodulin dependen... XM_011515547.1 70.8% 70.8% 947_1019delinsC;1131_1175del;1224_1724del
64 human 818 CAMK2G calcium/calmodulin dependen... NM_001367548.1 70.2% 76.9% (many diffs)
65 human 818 CAMK2G calcium/calmodulin dependen... NM_001367544.1 70.1% 77.5% (many diffs)
66 human 818 CAMK2G calcium/calmodulin dependen... NM_001367534.1 69% 75.7% (many diffs)
67 human 816 CAMK2B calcium/calmodulin dependen... XM_017012666.2 68.9% 68.8% 0_1ins387;560_632delinsC;744_788del
68 human 816 CAMK2B calcium/calmodulin dependen... XM_017012669.2 67.8% 66.8% (many diffs)
69 human 818 CAMK2G calcium/calmodulin dependen... XM_024448219.1 65.4% 71.2% (many diffs)
70 human 818 CAMK2G calcium/calmodulin dependen... NM_001367539.1 61.1% 66.6% (many diffs)
71 human 818 CAMK2G calcium/calmodulin dependen... NM_001367537.1 60.4% 63% (many diffs)
72 human 816 CAMK2B calcium/calmodulin dependen... XM_017012663.2 53.7% 50.7% (many diffs)
73 human 816 CAMK2B calcium/calmodulin dependen... XM_011515559.2 52.7% 52.6% (many diffs)
74 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514479.2 92.1% 99.2% (many diffs)
75 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514476.1 89.5% 96.3% (many diffs)
76 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514477.1 89.3% 96.1% (many diffs)
77 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514475.1 87.8% 94.4% (many diffs)
78 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314240.1 87.7% 94.5% (many diffs)
79 mouse 12323 Camk2b calcium/calmodulin-dependen... NM_001174054.1 87.6% 94.3% (many diffs)
80 mouse 12323 Camk2b calcium/calmodulin-dependen... NM_007595.5 85.4% 91.8% (many diffs)
81 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314239.1 85.3% 91.8% (many diffs)
82 mouse 12323 Camk2b calcium/calmodulin-dependen... NM_001174053.1 84.6% 91.2% (many diffs)
83 mouse 12325 Camk2g calcium/calmodulin-dependen... NM_001039139.2 76.8% 87.9% (many diffs)
84 mouse 12325 Camk2g calcium/calmodulin-dependen... NM_001039138.2 76.7% 86.1% (many diffs)
85 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_017315827.1 76.1% 87% (many diffs)
86 mouse 12322 Camk2a calcium/calmodulin-dependen... XM_017317805.2 75.8% 81.1% (many diffs)
87 mouse 12322 Camk2a calcium/calmodulin-dependen... NM_177407.4 75.6% 81.1% (many diffs)
88 mouse 12325 Camk2g calcium/calmodulin-dependen... NM_178597.5 75.3% 83.9% (many diffs)
89 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518497.2 74.5% 81.9% (many diffs)
90 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514469.2 73.8% 79.5% (many diffs)
91 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_017315826.1 73.8% 84.4% (many diffs)
92 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518496.3 73.7% 82.7% (many diffs)
93 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514470.3 73.7% 79.4% (many diffs)
94 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518498.2 73.2% 83.5% (many diffs)
95 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518494.2 72.5% 80.7% (many diffs)
96 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514467.2 72.2% 77.7% (many diffs)
97 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314238.1 72% 77.5% (many diffs)
98 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518492.2 71.9% 80.4% (many diffs)
99 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314237.1 71% 76.5% (many diffs)
100 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518490.3 70.7% 78.5% (many diffs)
101 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514465.2 69.5% 74.7% (many diffs)
102 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_006514464.2 69.5% 74.8% (many diffs)
103 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518489.2 69.3% 77.5% (many diffs)
104 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518488.2 68.2% 75.7% (many diffs)
105 mouse 12325 Camk2g calcium/calmodulin-dependen... XM_006518500.3 57.5% 62.4% (many diffs)
106 mouse 12323 Camk2b calcium/calmodulin-dependen... XM_017314241.1 46.1% 45.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1575
ORF length:
1509
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CACCACGGTG ACCTGCACCC GCTTCACCGA CGAGTACCAG CTCTACGAGG
121ATATTGGCAA GGGGGCTTTC TCTGTGGTCC GACGCTGTGT CAAGCTCTGC ACCGGCCATG
181AGTATGCAGC CAAGATCATC AACACCAAGA AGCTGTCAGC CAGAGATCAC CAGAAGCTGG
241AGAGAGAGGC TCGGATCTGC CGCCTTCTGA AGCATTCCAA CATCGTGCGT CTCCACGACA
301GCATCTCCGA GGAGGGCTTC CACTACCTGG TCTTCGATCT GGTCACTGGT GGGGAGCTCT
361TTGAAGACAT TGTGGCGAGA GAGTACTACA GCGAGGCTGA TGCCAGTCAC TGTATCCAGC
421AGATCCTGGA GGCCGTTCTC CATTGTCACC AAATGGGGGT CGTCCACAGA GACCTCAAGC
481CGGAGAACCT GCTTCTGGCC AGCAAGTGCA AAGGGGCTGC AGTGAAGCTG GCAGACTTCG
541GCCTAGCTAT CGAGGTGCAG GGGGACCAGC AGGCATGGTT TGGTTTCGCT GGCACACCAG
601GCTACCTGTC CCCTGAGGTC CTTCGCAAAG AGGCGTATGG CAAGCCTGTG GACATCTGGG
661CATGTGGGGT GATCCTGTAC ATCCTGCTCG TGGGCTACCC ACCCTTCTGG GACGAGGACC
721AGCACAAGCT GTACCAGCAG ATCAAGGCTG GTGCCTATGA CTTCCCGTCC CCTGAGTGGG
781ACACCGTCAC TCCTGAAGCC AAAAACCTCA TCAACCAGAT GCTGACCATC AACCCTGCCA
841AGCGCATCAC AGCCCATGAG GCCCTGAAGC ACCCGTGGGT CTGCCAACGC TCCACGGTAG
901CATCCATGAT GCACAGACAG GAGACTGTGG AGTGTCTGAA AAAGTTCAAT GCCAGGAGAA
961AGCTCAAGGG AGCCATCCTC ACCACCATGC TGGCCACACG GAATTTCTCA GCAGCCAAGA
1021GTTTACTCAA CAAGAAAGCA GATGGAGTCA AGCCCCAGAC GAATAGCACC AAAAACAGTG
1081CAGCCGCCAC CAGCCCCAAA GGGACGCTTC CTCCTGCCGC CCTGGAGTCT TCTGACAGTG
1141CCAATACCAC CATAGAGGAT GAAGACGCTA AAGCCCGGAA GCAGGAGATC ATTAAGACCA
1201CGGAGCAGCT CATCGAGGCC GTCAACAACG GTGACTTTGA GGCCTACGCG AAAATCTGTG
1261ACCCAGGGCT GACCTCGTTT GAGCCTGAAG CACTGGGCAA CCTGGTTGAA GGGATGGACT
1321TCCACAGATT CTACTTCGAG AACCTGCTGG CCAAGAACAG CAAGCCGATC CACACGACCA
1381TCCTGAACCC ACACGTGCAC GTCATTGGAG AGGATGCCGC CTGCATCGCT TACATCCGGC
1441TCACGCAGTA CATTGACGGG CAGGGCCGGC CCCGCACCAG CCAGTCTGag gagacccgcg
1501tgtggcaccg ccgcgacggc aagtggcaga acgtgcactt ccactgctcg ggcgcgcctg
1561tggccccgct gcagtgccca actttcttgt acaaagttgg cattataaga aagcattgct
1621tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)

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