Transcript: Human NM_001137608.3

Homo sapiens zinc finger protein 732 (ZNF732), mRNA.

Source:
NCBI, updated 2019-06-30
Taxon:
Homo sapiens (human)
Gene:
ZNF732 (654254)
Length:
2346
CDS:
165..1922

Additional Resources:

NCBI RefSeq record:
NM_001137608.3
NBCI Gene record:
ZNF732 (654254)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001137608.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000262790 GTCGGTTCACAACCCTTAATG pLKO_005 1363 CDS 100% 13.200 18.480 N ZNF732 n/a
2 TRCN0000262789 TCGTTCCACAAACTTATATTA pLKO_005 444 CDS 100% 15.000 10.500 N ZNF732 n/a
3 TRCN0000262787 CGCATACCTGAATCAACATAA pLKO_005 2124 3UTR 100% 13.200 9.240 N ZNF732 n/a
4 TRCN0000262786 GACGTTCCAGAGTCCTGAATA pLKO_005 1783 CDS 100% 13.200 9.240 N ZNF732 n/a
5 TRCN0000262788 ATGGTCCACAGACCTGAATAA pLKO_005 1448 CDS 100% 13.200 7.920 N ZNF732 n/a
6 TRCN0000021908 TCAGGGATGTGGCCATAGAAT pLKO.1 181 CDS 100% 5.625 2.813 Y ZNF765 n/a
7 TRCN0000159583 CCCTTAATGAACATAAGAGAA pLKO.1 1375 CDS 100% 4.950 2.475 Y ZNF718 n/a
8 TRCN0000235273 ACTGGAGAGAAACCTTATAAA pLKO_005 1569 CDS 100% 15.000 7.500 Y Gm10771 n/a
9 TRCN0000337271 ACTGGAGAGAAACCTTATAAA pLKO_005 1569 CDS 100% 15.000 7.500 Y ZNF286B n/a
10 TRCN0000158848 GAGAAACCTTACAAATGTGAT pLKO.1 1491 CDS 100% 4.950 2.475 Y ZNF28 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001137608.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 TRCN0000478123 AGAAGATGTATCCTCCGGGTTGTT pLX_317 11.6% 71.7% 62.2% V5 (many diffs) n/a
2 ccsbBroadEn_14883 pDONR223 94% 71.2% 62% None (many diffs) n/a
3 ccsbBroad304_14883 pLX_304 0% 71.2% 62% V5 (many diffs) n/a
4 ccsbBroadEn_13469 pDONR223 100% 14.1% 11.4% None (many diffs) n/a
5 ccsbBroad304_13469 pLX_304 0% 14.1% 11.4% V5 (many diffs) n/a
6 TRCN0000469082 CACTTTTCAGCTCGAAATTAAATC pLX_317 100% 14.1% 11.4% V5 (many diffs) n/a
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