Construct: ORF TRCN0000467038

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011402.1_s317c1
Derived from:
ccsbBroadEn_01621
DNA Barcode:
ATGCTACGCCCGAGCGTATCCGTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SULT1A3 (6818)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000467038
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 445329 SULT1A4 sulfotransferase family 1A ... NM_001017390.2 100% 100%
2 human 6818 SULT1A3 sulfotransferase family 1A ... NM_177552.3 100% 100%
3 human 6817 SULT1A1 sulfotransferase family 1A ... NM_001055.3 94.4% 92.8% (many diffs)
4 human 6817 SULT1A1 sulfotransferase family 1A ... NM_177529.2 94.4% 92.8% (many diffs)
5 human 6817 SULT1A1 sulfotransferase family 1A ... NM_177530.2 94.4% 92.8% (many diffs)
6 human 6817 SULT1A1 sulfotransferase family 1A ... NM_177534.2 94.4% 92.8% (many diffs)
7 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023611.2 94.4% 92.8% (many diffs)
8 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023612.2 94.4% 92.8% (many diffs)
9 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023613.2 94.4% 92.8% (many diffs)
10 human 6817 SULT1A1 sulfotransferase family 1A ... XM_024450409.1 94.4% 92.8% (many diffs)
11 human 6817 SULT1A1 sulfotransferase family 1A ... XM_024450410.1 94.4% 92.8% (many diffs)
12 human 6817 SULT1A1 sulfotransferase family 1A ... XM_024450411.1 94.4% 92.8% (many diffs)
13 human 6799 SULT1A2 sulfotransferase family 1A ... NM_177528.2 93.5% 90.5% (many diffs)
14 human 6799 SULT1A2 sulfotransferase family 1A ... NM_001054.4 93.4% 90.1% (many diffs)
15 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023604.1 92.5% 91% (many diffs)
16 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023605.1 92.5% 91% (many diffs)
17 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023608.1 92.5% 91% (many diffs)
18 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023609.1 92.5% 91% (many diffs)
19 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023610.1 92.5% 91% (many diffs)
20 human 6817 SULT1A1 sulfotransferase family 1A ... XM_017023607.2 72.1% 70.9% (many diffs)
21 human 6817 SULT1A1 sulfotransferase family 1A ... XM_024450408.1 72% 70.8% (many diffs)
22 human 6799 SULT1A2 sulfotransferase family 1A ... NM_001363863.1 67.8% 62.2% (many diffs)
23 human 6817 SULT1A1 sulfotransferase family 1A ... NM_177536.3 64.6% 50.7% (many diffs)
24 human 6817 SULT1A1 sulfotransferase family 1A ... XR_001751973.1 61.5% (many diffs)
25 human 100526831 SLX1B-SULT1A4 SLX1B-SULT1A4 readthrough (... NR_037609.1 39.9% 1_921del;1807_2214del
26 human 100526830 SLX1A-SULT1A3 SLX1A-SULT1A3 readthrough (... NR_037608.1 39.9% 1_921del;1807_2218del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
954
ORF length:
885
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggagctgatc caggacacct cccgcccgcc actggagtac gtgaaggggg
121tcccgctcat caagtacttt gcagaggcac tggggcccct gcagagcttc caagcccgac
181ctgatgacct gctcatcaac acctacccca agtctggcac cacctgggtg agccagatac
241tggacatgat ctaccagggc ggcgacctag agaagtgtaa ccgggctccc atctacgtac
301gggtgccctt ccttgaggtc aatgatccag gggaaccctc agggctggag actctgaaag
361acacaccgcc cccacggctc atcaagtcac acctgcccct ggctctgctc cctcagactc
421tgttggatca gaaggtcaag gtggtctatg ttgcccgaaa cccaaaggac gtggcggtct
481cctactacca tttccaccgt atggaaaagg cgcaccctga gcctgggacc tgggacagct
541tcctggaaaa gttcatggct ggagaagtgt cctacgggtc ctggtaccag cacgtgcagg
601agtggtggga gctgagccgc acccaccctg ttctctacct cTTCTATGAA GACATGAAGG
661AGAACCCCAA AAGGGAGATT CAAAAGATCC TGGAGTTTGT GGGGCGCTCC CTGCCAGAGG
721AGACCATGGA CTTCATGGTT CAGCACACGT CGTTCAAGGA GATGAAGAAG AACCCTATGA
781CCAACTACAC CACCGTCCCC CAGGAGCTCA TGGACCACAG CATCTCCCCC TTCATGAGGA
841AAGGCATGGC TGGGGACTGG AAGACCACCT TCACCGTGGC GCAGAATGAG CGCTTCGATG
901CGGACTATGC GGAGAAGATG GCAGGCTGCA GCCTCAGCTT CCGCTCTGAG CTGTTGCCAA
961CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1021ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1081TATCTTGTGG AAAGGACGAA TGCTACGCCC GAGCGTATCC GTAACGCGTT AAGTCgacaa
1141tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)