Construct: ORF TRCN0000470126

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012175.1_s317c1
Derived from:
ccsbBroadEn_09332
DNA Barcode:
TGCTAGGGAATCCTAGGAAAAACG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LMBRD2 (92255)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470126
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 92255 LMBRD2 LMBR1 domain containing 2 NM_001007527.2 99.9% 100% 927G>T
2 human 92255 LMBRD2 LMBR1 domain containing 2 XM_011514162.2 99.9% 100% 927G>T
3 human 92255 LMBRD2 LMBR1 domain containing 2 XR_001742340.2 67.4% (many diffs)
4 human 92255 LMBRD2 LMBR1 domain containing 2 XM_017010024.2 66.5% 65.5% (many diffs)
5 human 92255 LMBRD2 LMBR1 domain containing 2 XR_001742339.1 25.4% (many diffs)
6 mouse 320506 Lmbrd2 LMBR1 domain containing 2 NM_177178.3 89.2% 94.5% (many diffs)
7 mouse 320506 Lmbrd2 LMBR1 domain containing 2 XM_006520091.4 89.2% 94.5% (many diffs)
8 mouse 320506 Lmbrd2 LMBR1 domain containing 2 XM_006520092.4 72.9% 77.4% (many diffs)
9 mouse 320506 Lmbrd2 LMBR1 domain containing 2 XR_003951400.1 22.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2154
ORF length:
2085
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gagtggtgca gctttgggac ttgagattgt ttttgtcttt tttctggcat
121tatttctgct tcatcgatat ggagacttta agaaacagca tagacttgtg attattggaa
181cactgcttgc ttggtatctc tgctttctta ttgtcttcat actgcctctg gatgttagta
241cgacaatata caaccggtgc aagcatgctg ctgcaaattc aagccctcct gagaatagca
301acattacagg attgtacgca actgctaacc ctgttccaag ccagcatcct tgtttcaagc
361catggagtta cattcctgat ggaatcatgc caattttctg gagggtagtg tattggacgt
421cacaattttt aacatggatt ctcttacctt ttatgcagtc atatgcaaga tcaggagggt
481tttccatcac tggaaagatc aaaactgcac taattgagaa tgcaatctac tatggcacct
541atttgctgat ttttggagca tttttaattt atgtagctgt aaacccacat ttacatttag
601aatggaacca gcttcagaca attgggatag ctgctgcaaa tacatggggt ctgtttcttc
661ttgtgttgtt gttggggtat ggcttggtgg aaattcctcg atcatactgg aatggagcaa
721aaaggggtta tctacttatg aaaacgtatt ttaaggcagc caaactgatg acagagaaag
781cagatgcaga agagaatttg gaagatgcca tggaggaggt tcgtaaagtg aatgaaagca
841tcaagtataa tcacccattg agaaaatgtg ttgatacaat acttaaaaag tgccctacag
901agtatcagga aaaaatgggt aggaacatgg atgattatga agattttgat gaaaagcata
961gtatctatcc aagtgaaaaa agtctggtaa aacttcataa acaggtgatt tattcagttc
1021agagacaccg tcgaactcaa gtacaatggc agattctttt ggaacaagca ttttatctag
1081aagatgtagc aaaaaatgaa actagtgcta ctcatcagtt tgttcacacc tttcaatcgc
1141cagagccaga aaatcgattt atccaatatt tttataatcc tacatttgaa tggtactggg
1201aatgtctttt gcgaccatgg ttttacaaga tacttgctgt ggttctgtcc atcttctctg
1261tgattgttgt gtggtcagag tgcacattct ttagcactac tcctgtctta tccctctttg
1321cggtcttcat acagctggca gaaaaaacat ataattatat ttatatcgag attgcctgct
1381tcctttccat cttcttccta agtatctgtg tttattctac tgtgttcagg attcgtgtat
1441ttaactatta ttatttggcc tcacatcacc agactgatgc ttatagcctt cttttcagtg
1501gcatgctatt ttgccgtttg acacctcctt tatgtcttaa tttcttgggt ttgacccata
1561tggattcatc tatctctcac aagaatactc aaccaactgc ttatacatct attatgggtt
1621ccatgaaagt tttatccttt attgcagatg gattctatat atattatcct atgttggtgg
1681taattctctg cattgctact tattttagtt tgggaacccg ttgtttgaat ctgctcggtt
1741tccagcagtt tatgggagat gatgatatga caTCAGACTT AGTTAATGAA GGAAAAGAAT
1801TAATCAGAAA AGAGAAGAGA AAAAGGCAAA GGCAAGAAGA AGGTGAAAAT CGAAGAAGAG
1861AATGGAAAGA ACGTTATGGA CACAATAGAG AAGATTCCAC TAGGAACAGA AATATTCATA
1921CTGACCCCAA AGAGTCAAAC TTCTCAGATG TTAATACCAA CCGTTCTGCA TTCAAATATA
1981CCAGGGCTAA TAACAGGACT GAAAGGGACC GGATAGAACT TCTCCAAGAT GCAGAACCTT
2041TGGATTTTAA TGCAGAAACA TTCACTGATG ATCCTCTTGA ATCTGAATCA GGAAGGTATC
2101AGCCTGGTGG ACGATATCTC TCGATGTCTC GCAGTGACAT ATTTAATGAT GTTTTGCCAA
2161CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
2221ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
2281TATCTTGTGG AAAGGACGAT GCTAGGGAAT CCTAGGAAAA ACGACGCGTT AAGTCgacaa
2341tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)