Construct: ORF TRCN0000480014

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019059.4_s317c1
Derived from:
ccsbBroadEn_14546
DNA Barcode:
GTACGCGAAGCTCCCAGGAGAAGC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
AXL (558)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480014
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 558 AXL AXL receptor tyrosine kinase NM_021913.5 100% 100%
2 human 558 AXL AXL receptor tyrosine kinase NM_001699.6 98.9% 98.9% 1284_1285ins27
3 human 558 AXL AXL receptor tyrosine kinase NM_001278599.1 70% 70% 0_1ins804
4 mouse 26362 Axl AXL receptor tyrosine kinase NM_009465.4 84.9% 87.5% (many diffs)
5 mouse 26362 Axl AXL receptor tyrosine kinase XM_006539989.3 84.9% 87.5% (many diffs)
6 mouse 26362 Axl AXL receptor tyrosine kinase NM_001190974.1 84.1% 86.9% (many diffs)
7 mouse 26362 Axl AXL receptor tyrosine kinase XM_006539991.3 84.1% 86.9% (many diffs)
8 mouse 26362 Axl AXL receptor tyrosine kinase NM_001190975.1 75.8% 78.6% (many diffs)
9 mouse 26362 Axl AXL receptor tyrosine kinase XM_006539992.2 75.8% 78.6% (many diffs)
10 mouse 26362 Axl AXL receptor tyrosine kinase XM_006539993.2 75% 77.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2751
ORF length:
2682
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgtggcgg tgccccagga tgggcagggt cccgctggcc tggtgcttgg
121cgctgtgcgg ctgggcgtgc atggccccca ggggcacgca ggctgaagaa agtcccttcg
181tgggcaaccc agggaatatc acaggtgccc ggggactcac gggcaccctt cggtgtcagc
241tccaggttca gggagagccc cccgaggtac attggcttcg ggatggacag atcctggagc
301tcgcggacag cacccagacc caggtgcccc tgggtgagga tgaacaggat gactggatag
361tggtcagcca gctcagaatc acctccctgc agctttccga cacgggacag taccagtgtt
421tggtgtttct gggacatcag accttcgtgt cccagcctgg ctatgttggg ctggagggct
481tgccttactt cctggaggag cccgaagaca ggactgtggc cgccaacacc cccttcaacc
541tgagctgcca agctcaggga cccccagagc ccgtggacct actctggctc caggatgctg
601tccccctggc cacggctcca ggtcacggcc cccagcgcag cctgcatgtt ccagggctga
661acaagacatc ctctttctcc tgcgaagccc ataacgccaa gggggtcacc acatcccgca
721cagccaccat cacagtgctc ccccagcagc cccgtaacct ccacctggtc tcccgccaac
781ccacggagct ggaggtggct tggactccag gcctgagcgg catctacccc ctgacccact
841gcaccctgca ggctgtgctg tcagacgatg ggatgggcat ccaggcggga gaaccagacc
901ccccagagga gcccctcacc tcgcaagcat ccgtgccccc ccatcagctt cggctaggca
961gcctccatcc tcacacccct tatcacatcc gcgtggcatg caccagcagc cagggcccct
1021catcctggac ccactggctt cctgtggaga cgccggaggg agtgcccctg ggcccccctg
1081agaacattag tgctacgcgg aatgggagcc aggccttcgt gcattggcaa gagccccggg
1141cgcccctgca gggtaccctg ttagggtacc ggctggcgta tcaaggccag gacaccccag
1201aggtgctaat ggacataggg ctaaggcaag aggtgaccct ggagctgcag ggggacgggt
1261ctgtgtccaa tctgacagtg tgtgtggcag cctacactgc tgctggggat ggaccctgga
1321gcctcccagt acccctggag gcctggcgcc cagggcaagc acagccagtc caccagctgg
1381tgaaggaacc ttcaactcct gccttctcgt ggccctggtg gtatgtactg ctaggagcag
1441tcgtggccgc tgcctgtgtc ctcatcttgg ctctcttcct tgtccaccgg cgaaagaagg
1501agacccgtta tggagaagtg tttgaaccaa cagtggaaag aggtgaactg gtagtcaggt
1561accgcgtgcg caagtcctac agtcgtcgga ccactgaagc taccttgaac agcctgggca
1621tcagtgaaga gctgaaggag aagctgcggg atgtgatggt ggaccggcac aaggtggccc
1681tggggaagac tctgggagag ggagagtttg gagctgtgat ggaaggccag ctcaaccagg
1741acgactccat cctcaaggtg gctgtgaaga cgatgaagat tgccatctgc acgaggtcag
1801agctggagga tttcctgagt gaagcggtct gcatgaagga atttgaccat cccaacgtca
1861tgaggctcat cggtgtctgt ttccagggtt ctgaacgaga gagcttccca gcacctgtgg
1921tcatcttacc tttcatgaaa catggagacc tacacagctt cctcctctat tcccggctcg
1981gggaccagcc agtgtacctg cccactcaga tgctagtgaa gttcatggca gacatcgcca
2041gtggcatgga gtatctgagt accaagagat tcatacaccg ggacctggcg gccaggaact
2101gcatgctgaa tgagaacatg tccgtgtgtg tggcggactt cgggctctcc aagaagatct
2161acaatgggga ctactaccgc cagggacgta tcgccaagat gccagtcaag tggattgcca
2221ttgagagtct agctgaccgt gtctacacca gcaagagcga tgtgtggtcc ttcggggtga
2281caatgtggga gattgccaca agaggccaaa ccccatatcc gggcgtggag aacagcgaga
2341tttatgacta tctgcgccag ggaaatcgcc tgaagcagcc TGCGGACTGT CTGGATGGAC
2401TGTATGCCTT GATGTCGCGG TGCTGGGAGC TAAATCCCCA GGACCGGCCA AGTTTTACAG
2461AGCTGCGGGA AGATTTGGAG AACACACTGA AGGCCTTGCC TCCTGCCCAG GAGCCTGACG
2521AAATCCTCTA TGTCAACATG GATGAGGGTG GAGGTTATCC TGAACCCCCT GGAGCTGCAG
2581GAGGAGCTGA CCCCCCAACC CAGCCAGACC CTAAGGATTC CTGTAGCTGC CTCACTGCGG
2641CTGAGGTCCA TCCTGCTGGA CGCTATGTCC TCTGCCCTTC CACAACCCCT AGCCCCGCTC
2701AGCCTGCTGA TAGGGGCTCC CCAGCAGCCC CAGGGCAGGA GGATGGTGCC TAGCCAACTT
2761TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
2821CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
2881CTTGTGGAAA GGACGAGTAC GCGAAGCTCC CAGGAGAAGC ACGCGTTAAG TCgacaatca
2941acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)