Construct: ORF TRCN0000487785

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020402.1_s317c1
DNA Barcode:
CCTCCAGGGTGACACTCCAAACGT
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
TAOK3 (51347)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000487785
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51347 TAOK3 TAO kinase 3 NM_001346488.2 99.9% 99.7% 140G>A;1231G>A
2 human 51347 TAOK3 TAO kinase 3 NM_001346489.2 99.9% 99.7% 140G>A;1231G>A
3 human 51347 TAOK3 TAO kinase 3 NM_016281.4 99.9% 99.7% 140G>A;1231G>A
4 human 51347 TAOK3 TAO kinase 3 NM_001346487.2 98.9% 98.7% 140G>A;1195_1221del;1258G>A
5 human 51347 TAOK3 TAO kinase 3 XM_005253898.2 98.9% 98.7% 140G>A;1195_1221del;1258G>A
6 human 51347 TAOK3 TAO kinase 3 XM_006719445.3 98.9% 98.7% 140G>A;1195_1221del;1258G>A
7 human 51347 TAOK3 TAO kinase 3 XM_011538437.2 98.9% 98.7% 140G>A;1195_1221del;1258G>A
8 human 51347 TAOK3 TAO kinase 3 XM_017019408.2 98.9% 98.7% 140G>A;1195_1221del;1258G>A
9 human 51347 TAOK3 TAO kinase 3 XM_017019409.2 98.9% 98.7% 140G>A;1195_1221del;1258G>A
10 human 51347 TAOK3 TAO kinase 3 XM_017019410.2 98.9% 98.7% 140G>A;1195_1221del;1258G>A
11 human 51347 TAOK3 TAO kinase 3 XM_024449010.1 98.9% 98.7% 140G>A;1195_1221del;1258G>A
12 human 51347 TAOK3 TAO kinase 3 NM_001346491.2 81% 80.9% 0_1ins510;721G>A
13 human 51347 TAOK3 TAO kinase 3 NM_001346492.2 81% 80.9% 0_1ins510;721G>A
14 human 51347 TAOK3 TAO kinase 3 XM_017019413.2 81% 80.9% 0_1ins510;721G>A
15 human 51347 TAOK3 TAO kinase 3 NM_001346490.2 80.2% 80.1% 0_1ins510;685_711del;748G>A
16 human 51347 TAOK3 TAO kinase 3 XM_017019412.2 80.2% 80.1% 0_1ins510;685_711del;748G>A
17 human 51347 TAOK3 TAO kinase 3 NM_001346493.2 78.3% 77.4% (many diffs)
18 human 51347 TAOK3 TAO kinase 3 NM_001346494.2 48.7% 48.7% 0_1ins1380
19 human 51347 TAOK3 TAO kinase 3 NM_001346495.2 48.7% 48.7% 0_1ins1380
20 human 51347 TAOK3 TAO kinase 3 NM_001346496.2 46.1% 45.3% (many diffs)
21 human 51347 TAOK3 TAO kinase 3 NM_001346497.2 46.1% 45.3% (many diffs)
22 mouse 330177 Taok3 TAO kinase 3 NM_001081308.2 88.5% 95.5% (many diffs)
23 mouse 330177 Taok3 TAO kinase 3 NM_001199685.1 88.5% 95.5% (many diffs)
24 mouse 330177 Taok3 TAO kinase 3 NM_183306.2 88.5% 95.5% (many diffs)
25 mouse 330177 Taok3 TAO kinase 3 XM_006530385.3 88.5% 95.5% (many diffs)
26 mouse 330177 Taok3 TAO kinase 3 XM_011248219.2 88.5% 95.5% (many diffs)
27 mouse 330177 Taok3 TAO kinase 3 XM_011248220.2 88.5% 95.5% (many diffs)
28 mouse 330177 Taok3 TAO kinase 3 XM_011248221.2 72.4% 77.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
2766
ORF length:
2694
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catgcgtaaa ggggtgctga aggacccaga gattgccgat ctattctaca
121aagatgatcc tgaggaactt tttattggtt tgcatgaaat tggacatgga agttttggag
181cagtttattt tgctacaaat gctcacacca atgaggtggt ggcaattaag aagatgtcct
241atagtgggaa gcagacccat gagaaatggc aagatattct taaggaagtt aaatttttac
301gacaattgaa gcatcctaat actattgagt acaaaggctg ttacttgaaa gaacacactg
361cttggttggt gatggaatat tgcttaggct cagcctctga tttattagaa gttcataaaa
421aaccacttca ggaagtggag atcgctgcca ttactcatgg agccttgcat ggactagcct
481acctacattc tcatgcattg attcataggg atattaaagc aggaaatatt cttctaacag
541agccaggtca ggtaaaacta gctgattttg gatctgcttc aatggcttct cctgccaact
601ccttcgtggg cacaccttac tggatggctc cagaggtgat cttagctatg gatgaaggac
661agtatgatgg gaaagttgat atttggtcac ttggcatcac ttgtattgaa ttggcggaac
721ggaagccgcc ccttttcaac atgaatgcaa tgagtgcctt atatcacatt gcccagaatg
781actccccaac gttacagtct aatgaatgga cagactcctt taggagattt gttgattact
841gcttgcagaa aatacctcag gaaaggccaa catcagcaga actattaagg catgactttg
901ttcgacgaga ccggccacta cgtgtcctca ttgacctcat acagaggaca aaagatgcag
961ttcgtgagct agataaccta cagtaccgaa aaatgaaaaa aatacttttc caagagacac
1021ggaatggacc cttgaatgag tcacaggagg atgaggaaga cagtgaacat ggaaccagcc
1081tgaacaggga aatggacagc ctgggcagca accattccat tccaagcatg tccgtgagca
1141caggcagcca gagcagcagt gtgaacagca tgcaggaagt catggacgag agcagttccg
1201aacttgtcat gatgcacgat gacgaaagca caatcaattc cagctcctcc gtcgtgcata
1261agaaagatca tgtattcata agggatgagg cgggccacgg caatcccagg cctgagccgc
1321ggcctaccca gtcagttcag agccaggccc tccactaccg gaacagagag cgctttgcca
1381cgatcaaatc agcatctttg gttacacgac agatccatga gcatgagcag gagaacgagt
1441tgcgggaaca gatgtcaggt tataagcgga tgcggcgcca gcaccagaag cagctgatcg
1501ccctggagaa caagctgaag gctgagatgg acgagcaccg cctcaagcta cagaaggagg
1561tggagacgca tgccaacaac tcgtccatcg agctggagaa gctggccaag aagcaagtgg
1621ctatcataga aaaggaggca aaggtagctg cagcagatga gaagaagttc cagcaacaga
1681tcttggccca gcagaagaaa gatttgacaa ctttcttaga aagtcagaag aagcagtata
1741agatttgtaa ggaaaaaata aaagaggaaa tgaatgagga ccatagcaca cccaagaaag
1801agaagcaaga gcggatctcc aaacataaag agaacttgca gcacacacag gctgaagagg
1861aagcccacct tctcactcaa cagagactgt actacgacaa aaattgtcgt ttcttcaagc
1921ggaaaataat gatcaagcgg cacgaggtgg agcagcagaa cattcgggag gaactaaata
1981aaaagaggac ccagaaggag atggagcatg ccatgctaat ccggcacgac gagtccaccc
2041gagagctaga gtacaggcag ctgcacacgt tacagaagct acgcatggat ctgatccgtt
2101tacagcacca gacggaactg gaaaaccagc tggagtacaa taagaggcga gaaagagaac
2161tgcacagaaa gcatgtcatg gaacttcggc aacagccaaa aaacttaaag gccatggaaa
2221tgcaaattaa aaaacagttt caggacactt gcaaagtaca gaccaaacag tataaagcac
2281tcaagaatca ccagttggaa gttactccaa agaatgagca caaaacaatc ttaaagacac
2341tgaaagatga gcagacaaga aaacttgcca ttttggcaga gcagtatgaa cagagtataa
2401atgaaatgat ggcctctcaa gcgttacggc tagatgaggc tcaagaagca gaatgccagg
2461ccttgaggct acagctccag caggaaatGG AGCTGCTCAA CGCCTACCAG AGCAAAATCA
2521AGATGCAAAC AGAGGCACAA CATGAACGTG AGCTCCAGAA GCTAGAGCAG AGAGTGTCTC
2581TGCGCAGAGC ACACCTTGAG CAGAAGATTG AAGAGGAGCT GGCTGCCCTT CAGAAGGAAC
2641GCAGCGAGAG AATAAAGAAC CTATTGGAAA GGCAAGAGCG AGAGATTGAA ACTTTTGACA
2701TGGAGAGCCT CAGAATGGGA TTTGGGAATT TGGTTACATT AGATTTTCCT AAGGAGGACT
2761ACAGATAGGA CCCAGCTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
2821CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
2881TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGACCTCCA GGGTGACACT CCAAACGTAC
2941GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)