Construct: ORF ccsbBroad304_07112

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008398.1_s304c1, BRDN0000410191
Derived from:
ccsbBroadEn_07112
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TXNRD1 (7296)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07112
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7296 TXNRD1 thioredoxin reductase 1 NM_182729.3 99.7% 99.3% 165C>T;1490G>N;1494A>N
2 human 7296 TXNRD1 thioredoxin reductase 1 NM_182742.3 99.7% 99.3% 165C>T;1490G>N;1494A>N
3 human 7296 TXNRD1 thioredoxin reductase 1 NM_182743.3 99.7% 99.3% 165C>T;1490G>N;1494A>N
4 human 7296 TXNRD1 thioredoxin reductase 1 NM_001261446.2 92.1% 91.7% (many diffs)
5 human 7296 TXNRD1 thioredoxin reductase 1 NM_001261445.2 90.7% 90.3% (many diffs)
6 human 7296 TXNRD1 thioredoxin reductase 1 NM_003330.4 90.3% 90% (many diffs)
7 human 7296 TXNRD1 thioredoxin reductase 1 NM_001093771.3 76.7% 76.4% (many diffs)
8 mouse 50493 Txnrd1 thioredoxin reductase 1 NM_001042513.1 85.5% 90.9% (many diffs)
9 mouse 50493 Txnrd1 thioredoxin reductase 1 NM_001042514.1 85.5% 90.9% (many diffs)
10 mouse 50493 Txnrd1 thioredoxin reductase 1 NM_015762.2 85.5% 90.9% (many diffs)
11 mouse 50493 Txnrd1 thioredoxin reductase 1 NM_001042523.1 69.6% 74% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1563
ORF length:
1497
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa cggccctgaa gatcttccca agtcctatga ctatgacctt atcatcattg
121gaggtggctc aggaggtctg gcagctgcta aggaggcagc ccaatatggc aagaaggtga
181tggtcctgga ctttgtcact cccacccctc ttggaactag atggggtctt ggaggaacat
241gtgtgaatgt gggttgcata cctaaaaaac tgatgcatca agcagctttg ttaggacaag
301ccctgcaaga ctctcgaaat tatggatgga aagtcgagga gacagttaag catgattggg
361acagaatgat agaagctgta cagaatcaca ttggctcttt gaattggggc taccgagtag
421ctctgcggga gaaaaaagtc gtctatgaga atgcttatgg gcaatttatt ggtcctcaca
481ggattaaggc aacaaataat aaaggcaaag aaaaaattta ttcagcagag agatttctca
541ttgccactgg tgaaagacca cgttacttgg gcatccctgg tgacaaagaa tactgcatca
601gcagtgatga tcttttctcc ttgccttact gcccgggtaa gaccctggtt gttggagcat
661cctatgtcgc tttggagtgc gctggatttc ttgctggtat tggtttagac gtcactgtta
721tggttaggtc cattcttctt agaggatttg accaggacat ggccaacaaa attggtgaac
781acatggaaga acatggcatc aagtttataa gacagttcgt accaattaaa gttgaacaaa
841ttgaagcagg gacaccaggc cgactcagag tagtagctca gtccaccaat agtgaggaaa
901tcattgaagg agaatataat acggtgatgc tggcaatagg aagagatgct tgcacaagaa
961aaattggctt agaaaccgta ggggtgaaga taaatgaaaa gactggaaaa atacctgtca
1021cagatgaaga acagaccaat gtgccttaca tctatgccat tggcgatata ttggaggata
1081aggtggagct caccccagtt gcaatccagg caggaagatt gctggctcag aggctctatg
1141caggttccac tgtcaagtgt gactatgaaa atgttccaac cactgtattt actcctttgg
1201aatatggtgc ttgtggcctt tctgaggaga aagctgtgga gaagtttggg gaagaaaata
1261ttgaggttta ccatagttac ttttggccat tggaatggac gattccgtca agagataaca
1321acaaatgtta tgcaaaaata atctgtaata ctaaagacaa tgaacgtgtt gtgggctttc
1381acgtactggg tccaaatgct ggagaagtta cacaaggctt tgcagctgcg ctcaaatgtg
1441gactgaccaa aaagcagctg gacagcacaa ttggaatcca ccctgtctgt gcagaggtat
1501tcacaacatt gtctgtgacc aagcgctctg gggcaagcat cctccaggct ggctnctgng
1561gttacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1621tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1681tctggatta

Download FASTA (ORF) (Full)