Construct: ORF ccsbBroad304_12180

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010082.1_s304c1, BRDN0000461453
Derived from:
ccsbBroadEn_12180
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RIC8B (55188)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12180
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001351364.2 100% 100%
2 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001330147.2 92.1% 91.7% (many diffs)
3 human 55188 RIC8B RIC8 guanine nucleotide exc... XR_002957346.1 90.2% (many diffs)
4 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001330146.2 89.4% 88.9% (many diffs)
5 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001351361.2 88.3% 87.6% (many diffs)
6 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001351363.2 87.7% 85.9% (many diffs)
7 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001330145.2 86.9% 86.4% (many diffs)
8 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001351362.2 86.6% 84.6% (many diffs)
9 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_018157.4 85.2% 83.4% (many diffs)
10 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001351366.2 84.7% 84.6% (many diffs)
11 human 55188 RIC8B RIC8 guanine nucleotide exc... NM_001351367.2 82.8% 81.2% (many diffs)
12 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147135.2 28.8% (many diffs)
13 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147137.2 28.2% (many diffs)
14 human 55188 RIC8B RIC8 guanine nucleotide exc... XR_002957348.1 28% (many diffs)
15 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147138.2 27.4% (many diffs)
16 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147133.2 27.3% (many diffs)
17 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147131.2 27.2% (many diffs)
18 human 55188 RIC8B RIC8 guanine nucleotide exc... XR_001748786.2 26.3% (many diffs)
19 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147139.2 26.3% (many diffs)
20 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147136.2 26.1% (many diffs)
21 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147132.2 25.4% (many diffs)
22 human 55188 RIC8B RIC8 guanine nucleotide exc... NR_147134.2 24.7% (many diffs)
23 human 55188 RIC8B RIC8 guanine nucleotide exc... XR_001748785.2 14.9% (many diffs)
24 human 55188 RIC8B RIC8 guanine nucleotide exc... XR_002957347.1 14.9% (many diffs)
25 human 55188 RIC8B RIC8 guanine nucleotide exc... XR_002957345.1 13.2% 0_1insATGCTTGCCAGT;1477_11092del
26 mouse 237422 Ric8b RIC8 guanine nucleotide exc... XM_006513625.2 87% 89.3% (many diffs)
27 mouse 237422 Ric8b RIC8 guanine nucleotide exc... NM_183172.2 82.5% 84.1% (many diffs)
28 mouse 237422 Ric8b RIC8 guanine nucleotide exc... NM_001013441.2 79.8% 81% (many diffs)
29 mouse 237422 Ric8b RIC8 guanine nucleotide exc... XR_380393.2 60.6% (many diffs)
30 mouse 237422 Ric8b RIC8 guanine nucleotide exc... XR_380394.3 24.6% (many diffs)
31 mouse 237422 Ric8b RIC8 guanine nucleotide exc... XR_380392.2 24.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1557
ORF length:
1488
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcttgccagt aaactctgtg aaggcatatt taaagtcctt ataaaggaca
121tcccaacaac atgtcaagtg tcctgcctgg aagtactccg cattctctcc agagacaaaa
181aggttttagt tcctgtgaca actaaggaaa atatgcagat actgctgcga ctagccaagc
241taaatgagtt agatgattct ttggagaaag tatcagagtt cccagttatt gtggagtcat
301taaaatgtct gtgtaatata gtgttcaaca gtcagatggc acagcagctc agcctggaac
361ttaatcttgc tgcaaagctc tgtaacctcc tgagaaagtg caaggaccgg aaatttatca
421atgacattaa gtgctttgac ttgcgcttgc tcttccttct gtcacttttg cacaccgaca
481tcaggtcaca attgcgctat gagctccagg gactaccgct gctaacgcag atcttggaaa
541gtgcctttag catcaagtgg accgatgagt atgaatcggc catagaccat aatggacctc
601ctctctcacc tcaggagaca gactgtgcca ttgaggccct caaagctctc ttcaatgtga
661cggtagacag ttggaaggtg cataaagaga gtgattctca tcagttccgt gtaatggcag
721ctgtccttcg tcattgttta ctaatcgtag gtccaactga agacaaaaca gaagagctac
781acagcaatgc agtcaacctt ttaagcaatg ttccagtctc ttgtttggat gttctcattt
841gtccgttaac ccatgaagaa acagcccaag aggcaacgac tctagatgaa ctgcccagta
901ataaaacagc tgagaaagaa acagttttga aaaacaatac catggtatac aatggtatga
961atatggaggc cattcatgtt ttactgaatt ttatggagaa gagaatagac aagggaagca
1021gctatagaga gggtctaact ccagttctca gcttattaac cgaatgttcc cgagcccatc
1081gaaacatccg aaaatttctc aaagatcagg ttttaccacc gttgagggat gtgacaaatc
1141gacctgaagt tggctcaact gtgagaaata agctggtgcg cctcatgaca catgttgacc
1201ttggagtcaa gcaaattgct gctgaattcc tttttgtcct ttgcaaagag agagtggata
1261gtctgctgaa atacactggc tatgggaatg ctgcaggact gttggcggcc aggggcctct
1321tggctggagg aagaggagat aattggtact cagaggatga ggacacagac actgaagaat
1381acaaaaatgc aaaaccaaac attaatctta tcactggtca tttagaggaa ccaatgccaa
1441accccataga tgaaatgaca gaagaacaaa aagaatatga agccatgaaa cttgtcaaca
1501tgcttgataa actttccagg agagcagatg tgaaggacct gcaccaggat ggtggtttgc
1561caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
1621ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
1681tta

Download FASTA (ORF) (Full)