Construct: ORF ccsbBroad304_14630

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019045.1_s304c1, BRDN0000459844
Derived from:
ccsbBroadEn_14630
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
EPHB6 (2051)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14630
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2051 EPHB6 EPH receptor B6 NM_004445.6 99.8% 99.8% (many diffs)
2 human 2051 EPHB6 EPH receptor B6 XM_011515879.1 99.8% 99.8% (many diffs)
3 human 2051 EPHB6 EPH receptor B6 XM_011515880.1 99.8% 99.8% (many diffs)
4 human 2051 EPHB6 EPH receptor B6 XM_024446674.1 99.8% 99.8% (many diffs)
5 human 2051 EPHB6 EPH receptor B6 XM_011515881.3 99.7% 99.7% (many diffs)
6 human 2051 EPHB6 EPH receptor B6 XM_011515882.2 96.7% 96.7% (many diffs)
7 human 2051 EPHB6 EPH receptor B6 XM_024446675.1 96.6% 96.6% (many diffs)
8 human 2051 EPHB6 EPH receptor B6 NR_104001.2 77.3% (many diffs)
9 human 2051 EPHB6 EPH receptor B6 NM_001280794.2 71.3% 71.3% (many diffs)
10 human 2051 EPHB6 EPH receptor B6 NM_001280795.2 71.3% 71.3% (many diffs)
11 mouse 13848 Ephb6 Eph receptor B6 NM_001146351.1 86.4% 91.9% (many diffs)
12 mouse 13848 Ephb6 Eph receptor B6 NM_007680.4 86.4% 91.9% (many diffs)
13 mouse 13848 Ephb6 Eph receptor B6 XR_377419.3 40.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3132
ORF length:
3063
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggctactgaa ggggctgccc agttagggaa cagagtggcg ggcatggtgt
121gtagcctatg ggtgctgctc ctggtgtctt cagttctggc tctggaagag gtattgctgg
181acaccaccgg agagacatct gagattggct ggctcaccta cccaccaggg gggtgggacg
241aggtgagtgt tctggacgac cagcgacgcc tgactcggac ctttgaggca tgtcatgtgg
301caggggcccc tccaggcacc gggcaggaca attggttgca gacacacttt gtggagcggc
361gcggggccca gagggcgcac attcgactcc acttctctgt gcgggcatgc tccagcctgg
421gtgtgagcgg cggcacctgc cgggagacct tcacccttta ctaccgtcag gctgaggagc
481ccgacagccc tgacagcgtt tcctcctggc acctcaaacg ctggaccaag gtggacacaa
541ttgcagcaga cgagagcttt ccctcctcct cctcctcctc ctcctcttct tcctctgcag
601cgtgggctgt gggaccccac ggggctgggc agcgggctgg actgcaactg aacgtcaaag
661agcggagctt tgggcctctc acccaacgcg gcttctacgt ggccttccag gacacggggg
721cctgcctggc cctggtcgct gtcaggctct tctcctacac ctgccctgcc gtgctccgat
781cctttgcttc ctttccagag acgcaggcca gtggggctgg gggggcctcc ctggtggcag
841ctgtgggcac ctgtgtggct catgcagagc cagaggagga tggagtaggg ggccaggcag
901gaggcagccc ccccaggctg cactgcaacg gggagggcaa gtggatggta gctgtcgggg
961gctgccgctg ccagcctgga taccaaccag cacgaggaga caaggcctgc caagcctgcc
1021cacgggggct ctataagtct tctgctggga atgctccctg ctcaccatgc cctgcccgca
1081gtcacgctcc caacccagca gcccccgttt gcccctgcct ggagggcttc taccgggcca
1141gttccgaccc accagaggcc ccctgcactg gtcctccatc ggctccccag gagctttggt
1201ttgaggtgca aggctcagca ctcatgctac actggcgcct gcctcgggag ctggggggtc
1261gaggggacct gctcttcaat gtcgtgtgca aggagtgtga aggccgccag gaacctgcca
1321gcggtggtgg gggcacttgt caccgctgca gggatgaggt ccacttcgac cctcgccaga
1381gaggcctgac tgagagccga gtgttagtgg ggggactccg ggcacacgta ccctacatct
1441tagaggtgca ggctgttaat ggggtgtctg agctcagccc tgaccctcct caggctgcag
1501ccatcaatgt cagcaccagc catgaagtgc cctctgctgt ccctgtggtg caccaggtga
1561gccgggcatc caacagcatc acggtgtcct ggccgcagcc cgaccagacc aatgggaaca
1621tcctggacta tcagctccgc tactatgacc aggcagaaga cgaatcccac tccttcaccc
1681tgaccagcga gaccaacact gccaccgtga cacagctgag ccctggccac atctatggtt
1741tccaggtgcg ggcccggact gctgccggcc acggccccta cgggggcaaa gtctatttcc
1801agacacttcc tcaaggggag ctgtcttccc agcttccgga aagactctcc ttggtgatcg
1861gctccatcct gggggctttg gccttcctcc tgctggcagc catcaccgtg ctggcggtcg
1921tcttccagcg gaagcggcgt gggactggct acacggagca gctgcagcaa tacagcagcc
1981caggactcgg ggtgaagtat tacatcgacc cctccaccta cgaggacccc tgtcaggcca
2041tccgagaact tgcccgggaa gtcgatcctg cttatatcaa gattgaggag gtcattggga
2101caggctcttt tggagaagtg cgccagggcc gcctgcagcc acggggacgg agggagcaga
2161ctgtggccat ccaggccctg tgggccgggg gcgccgaaag cctgcagatg accttcctgg
2221gccgggccgc agtgctgggt cagttccagc accccaacat cctgcggctg gagggcgtgg
2281tcaccaagag ccgacccctc atggtgctga cggagttcat ggagcttggc cccctggaca
2341gcttcctcag gcagcgggag ggccagttca gcagcctgca gctggtggcc atgcagcggg
2401gagtggctgc tgccatgcag tacctgtcca gctttgcctt cgtccatcgc tcgctgtctg
2461cccacagcgt gctggtgaat agccacttgg tgtgcaaggt ggcccgtctt ggccacagtc
2521ctcagggccc aagttgtttg cttcgctggg cagccccaga ggtcattgca catggaaagc
2581atacaacatc cagtgatgtc tggagctttg ggatactcat gtgggaagtg atgagttatg
2641gagaacggcc ttactgggac atgagtgagc aggaggtact aaatgcaata gagcaggagt
2701tccggctgcc cccgcctcca ggctgtcctc ctggattaca tctacttatg ttggacactt
2761ggcagaagga ccgtgcccgg cggcctcatt ttgaccagct ggtggctgca tttgacaaga
2821tgatccgcaa gccagatacc ctgcaggctg gcggggaccc aggggaaagg ccttcccagg
2881cccttctgac ccctgtggcc ctggactttc cttgtctgga ctcaccccag gcctggcttt
2941cagccattgg actggagtgc taccaggaca acttctccaa gtttggcctc tgtaccttca
3001gtgatgtggc tcagctcagc ctagaagacc tgcctgccct gggcatcacc ctggctggcc
3061accagaagaa gctgctgcac cacatccagc tccttcagca acacctgagg cagcagggct
3121cagtggaggt cttgccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
3181tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
3241caatcaacct ctggatta

Download FASTA (ORF) (Full)