Construct: ORF ccsbBroad304_14748
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF018984.1_s304c1, BRDN0000459467
- Derived from:
- ccsbBroadEn_14748
- DNA Barcode:
- None
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- CDK14 (5218)
Vector Information:
- Vector Backbone:
- pLX_304
- Pol II Cassette 1:
- PGK-BlastR
- Pol II Cassette 2:
- CMV-ccsbBroad304_14748
- Selection Marker:
- BlastR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 5218 | CDK14 | cyclin dependent kinase 14 | NM_012395.3 | 99.4% | 99.1% | (many diffs) |
| 2 | human | 5218 | CDK14 | cyclin dependent kinase 14 | NM_001287136.1 | 93.2% | 92.9% | (many diffs) |
| 3 | human | 5218 | CDK14 | cyclin dependent kinase 14 | NM_001287135.2 | 92.8% | 90.2% | (many diffs) |
| 4 | human | 5218 | CDK14 | cyclin dependent kinase 14 | NM_001287137.1 | 74.8% | 70.5% | (many diffs) |
| 5 | mouse | 18647 | Cdk14 | cyclin-dependent kinase 14 | XM_006503544.4 | 85.8% | 91.1% | (many diffs) |
| 6 | mouse | 18647 | Cdk14 | cyclin-dependent kinase 14 | NM_011074.3 | 85.2% | 89% | (many diffs) |
| 7 | mouse | 18647 | Cdk14 | cyclin-dependent kinase 14 | NM_001310448.1 | 85.1% | 91.5% | (many diffs) |
| 8 | mouse | 18647 | Cdk14 | cyclin-dependent kinase 14 | XM_006503547.4 | 85.1% | 91.5% | (many diffs) |
| 9 | mouse | 18647 | Cdk14 | cyclin-dependent kinase 14 | XM_017320708.1 | 85.1% | 91.5% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 1419
- ORF length:
- 1350
- Sequence:
-
1 ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag 61 ttggcaccat gcacggttac tttggctgca atgctgctgc agagcccggt tactctgcct 121 tcgtgggaac tccacagata tgtgtcacaa agatgtctac acggaactgc cagggaatgg 181 actcagtgat caaacccctg gacacaattc ctgaggataa aaaagtcaga gttcagagga 241 cacagagcac ttttgaccca tttgagaaac cagctaatca agtaaagagg gtgcattctg 301 agaacaatgc ttgcattaac tttaagacct cctccactgg caaagagtca cctaaagtta 361 ggcggcactc cagccccagc tcgccaacaa gtcccaaatt tggaaaagct gactcatatg 421 aaaagctgga aaaactaggg gaaggatctt atgctacagt atacaaaggg aaaagcaagg 481 taaatgggaa gttggtagct ctgaaggtga tcaggctgca ggaagaagaa gggacacctt 541 tcacagctat cagggaagct tctcttttaa aaggactaaa acatgctaac atagtgctac 601 ttcatgacat catccatacc aaggagacgc tgacacttgt gtttgaatat gtgcacactg 661 atttatgtca gtacatggac aagcaccctg gggggctgca tccagataat gtgaagttgt 721 ttttatttca gttgctgcga ggtctgtctt acatccacca gcgttatatt ttgcacagag 781 acctgaaacc acagaacntt ctgatcantg acacgggggn nttaaagctg gcagatttcg 841 gtcttgcaag agcaaaatcc gtccctagcc acacatactc caacgaagtg gttaccttgt 901 ggtacagacc tccagatgtc cttctaggct caacagaata ttccacctgc cttgacatgt 961 ggggagtagg ttgcatcttt gttgaaatga tccaaggagt tgctgctttt ccaggaatga 1021 aagacattca ggatcaactt gaacgaatat ttctggttct tggaacacca aatgaggaca 1081 catggcctgg agttcattct ttaccacatt ttaagccaga acgctttacc ctgtacagct 1141 ctaaaaacct tagacaagca tggaataagc tcagctatgt gaaccatgca gaggacctgg 1201 cctccaagct cctacaatgt tccccaaaga acagactgtc ggcacaggct gccttgagcc 1261 acgagtattt tagtgacctg ccgccacggc tatgggaact caccgacatg tcttctattt 1321 ttactgtccc aaatgtgaga ttgcaaccag aagctggaga aagcatgcgg gcctttggga 1381 aaaacaatag ttatggcaaa agtctatcaa acagcaagtt gccaactttc ttgtacaaag 1441 tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta 1501 gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta