Construct: ORF ccsbBroadEn_02232

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014948.1_s300c1, BRDN0000395739
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM63A (9725)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9725 TMEM63A transmembrane protein 63A NM_014698.3 100% 100%
2 human 9725 TMEM63A transmembrane protein 63A XM_011544328.3 100% 100%
3 human 9725 TMEM63A transmembrane protein 63A XM_011544329.3 100% 100%
4 human 9725 TMEM63A transmembrane protein 63A XM_011544330.3 100% 100%
5 human 9725 TMEM63A transmembrane protein 63A XM_011544331.3 96.4% 96.2% 1484_1485ins87
6 human 9725 TMEM63A transmembrane protein 63A XM_011544332.3 81.7% 77.8% 0_1ins389;125_126ins52
7 human 9725 TMEM63A transmembrane protein 63A XM_006711841.4 78% 72.8% 0_1ins370;143_144ins161
8 human 9725 TMEM63A transmembrane protein 63A XR_949163.3 70.3% 1_284del;2706_3441del
9 human 9725 TMEM63A transmembrane protein 63A XR_001737552.2 54.2% 1_281del;1658_1659ins194;2509_3911del
10 mouse 208795 Tmem63a transmembrane protein 63a NM_144794.2 87.2% 89.7% (many diffs)
11 mouse 208795 Tmem63a transmembrane protein 63a XM_006496721.3 87.2% 89.7% (many diffs)
12 mouse 208795 Tmem63a transmembrane protein 63a XM_006496722.2 87.2% 89.7% (many diffs)
13 mouse 208795 Tmem63a transmembrane protein 63a XM_006496723.3 87.2% 89.7% (many diffs)
14 mouse 208795 Tmem63a transmembrane protein 63a XR_001783670.1 64.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2487
ORF length:
2421
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAT GGACTCCCCG TTCCTGGAGC TGTGGCAGTC CAAGGCAGTG TCCATCAGGG
121AGCAGCTGGG ACTCGGGGAC CGGCCCAACG ACTCCTATTG CTACAACTCG GCCAAAAACA
181GCACCGTGCT CCAGGGGGTC ACCTTTGGTG GCATCCCCAC TGTCCTGCTC ATAGACGTCA
241GCTGCTTCCT GTTCTTAATC TTGGTGTTTT CTATTATAAG AAGAAGATTC TGGGACTATG
301GCCGCATTGC CCTGGTGTCA GAAGCAGACA GCGAGTCCAG ATTTCAGAGA TTGTCATCGA
361CTTCCTCCTC AGGTCAACAA GACTTTGAAA ATGAGCTGGG ATGCTGTCCC TGGCTGACTG
421CCATCTTCCG TCTGCATGAT GACCAGATCC TGGAATGGTG TGGGGAGGAC GCCATCCACT
481ACCTGTCCTT CCAGAGGCAC ATCATCTTCC TGTTGGTGGT GGTCAGCTTT TTGTCCCTGT
541GTGTCATCCT GCCTGTCAAC CTCTCAGGGG ACTTGCTGGA CAAAGACCCG TATAGTTTTG
601GGAGGACAAC AATAGCAAAC CTACAGACTG ACAATGACCT CCTTTGGCTG CACACCATCT
661TTGCTGTCAT TTACCTCTTC CTCACTGTGG GTTTCATGCG GCACCACACT CAGTCCATTA
721AGTACAAAGA GGAGAACCTG GTGAGGCGGA CCCTGTTCAT CACAGGACTC CCCAGAGATG
781CCAGGAAGGA GACTGTGGAG AGCCACTTCC GGGACGCGTA TCCCACGTGT GAGGTGGTTG
841ATGTGCAGCT GTGCTACAAC GTGGCCAAAC TGATCTACCT GTGCAAGGAG AAAAAGAAGA
901CTGAGAAGAG CCTGACCTAT TACACAAACC TGCAGGTGAA GACAGGCCAG CGGACCCTCA
961TCAACCCCAA GCCCTGTGGC CAGTTTTGCT GCTGTGAAGT GCTGGGCTGT GAGTGGGAAG
1021ACGCCATCTC TTACTACACA CGGATGAAGG ACAGGCTGCT GGAGAGGATC ACAGAGGAAG
1081AACGCCACGT CCAGGACCAG CCCCTGGGAA TGGCCTTCGT CACCTTCCAG GAGAAGTCCA
1141TGGCCACCTA CATCCTGAAA GATTTCAATG CCTGCAAGTG TCAGAGCCTT CAGTGCAAAG
1201GTGAGCCCCA GCCGTCCTCC CATAGCAGGG AGCTCTATAC CTCCAAGTGG ACAGTCACCT
1261TTGCTGCTGA CCCTGAGGAC ATCTGCTGGA AGAACCTCTC TATCCAGGGC CTCCGCTGGT
1321GGCTACAGTG GCTGGGCATC AACTTCACCC TCTTCCTGGG GCTATTTTTC CTGACCACAC
1381CCTCCATCAT CCTGTCCACC ATGGACAAGT TTAATGTCAC CAAACCCATC CATGCGCTGA
1441ATAACCCGAT CATCAGCCAG TTCTTCCCCA CCCTCCTGCT CTGGTCCTTC TCGGCCCTGC
1501TCCCCTCCAT TGTCTACTAC TCTACACTGC TGGAGTCTCA CTGGACCAAG TCGGGGGAAA
1561ACCAGATCAT GATGACCAAA GTCTACATAT TCTTGATCTT CATGGTGCTG ATCCTGCCCT
1621CCCTGGGTCT CACCAGTCTA GATTTTTTCT TCCGGTGGCT CTTTGACAAA ACTTCCTCGG
1681AGGCCTCCAT CAGGTTGGAG TGCGTCTTCC TGCCTGACCA GGGTGCCTTC TTTGTGAACT
1741ATGTCATCGC CTCGGCCTTC ATCGGCAATG GCATGGAGCT GCTGCGGCTG CCAGGTCTCA
1801TCCTCTATAC CTTCCGCATG ATCATGGCCA AGACGGCTGC TGACCGCAGG AATGTCAAGC
1861AGAACCAGGC CTTCCAGTAC GAGTTTGGAG CCATGTATGC ATGGATGCTG TGTGTCTTCA
1921CTGTCATCGT GGCCTACAGC ATCACTTGTC CCATCATCGC GCCATTTGGC CTCATCTACA
1981TCCTGCTCAA GCACATGGTG GACCGGCACA ACCTCTACTT CGTCTACCTC CCAGCCAAGC
2041TGGAGAAGGG GATCCACTTT GCCGCTGTGA ACCAGGCCTT GGCAGCCCCC ATCCTGTGCC
2101TCTTCTGGCT CTACTTCTTT TCCTTCCTGC GCCTGGGTAT GAAGGCCCCC GCCACTCTGT
2161TCACCTTCCT GGTGCTGCTG CTCACCATCC TGGTCTGCCT GGCTCACACC TGCTTTGGAT
2221GCTTCAAGCA CCTCAGCCCT CTGAACTACA AAACAGAAGA GCCTGCAAGT GACAAAGGAA
2281GTGAGGCAGA GGCCCACATG CCCCCACCGT TCACACCCTA CGTGCCTCGG ATTCTGAACG
2341GCTTGGCCTC GGAGAGGACA GCACTGTCTC CGCAGCAGCA GCAGCAGCAG ACCTATGGTG
2401CCATCCACAA CATCAGCGGG ACTATCCCTG GACAGTGCTT GGCGCAGAGC GCCACGGGCA
2461GTGTGGCTGC TGCCCCCCAG GAGGCCTGCC CAACTTTCTT GTACAAAGTt ggcattataa
2521gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)

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