Construct: ORF ccsbBroadEn_13979

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003188.1_s300c1, BRDN0000394043
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UGT2B7 (7364)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7364 UGT2B7 UDP glucuronosyltransferase... NM_001074.4 99.9% 99.2% 1573delA
2 human 7365 UGT2B10 UDP glucuronosyltransferase... NM_001075.6 92.5% 86.9% (many diffs)
3 human 7365 UGT2B10 UDP glucuronosyltransferase... XM_017008585.2 92% 86.5% (many diffs)
4 human 10720 UGT2B11 UDP glucuronosyltransferase... NM_001073.3 91.7% 85% (many diffs)
5 human 54490 UGT2B28 UDP glucuronosyltransferase... NM_053039.2 91.3% 84.4% (many diffs)
6 human 7363 UGT2B4 UDP glucuronosyltransferase... NM_021139.3 90.3% 84.5% (many diffs)
7 human 7367 UGT2B17 UDP glucuronosyltransferase... NM_001077.3 85.5% 76.4% (many diffs)
8 human 7367 UGT2B17 UDP glucuronosyltransferase... XM_024454205.1 85.5% 76.4% (many diffs)
9 human 7366 UGT2B15 UDP glucuronosyltransferase... NM_001076.4 84.7% 77.5% (many diffs)
10 human 7365 UGT2B10 UDP glucuronosyltransferase... NM_001144767.3 77.7% 72.7% (many diffs)
11 human 10720 UGT2B11 UDP glucuronosyltransferase... XM_011531550.2 77.4% 72.2% (many diffs)
12 human 7364 UGT2B7 UDP glucuronosyltransferase... NM_001330719.1 69.4% 68.6% (many diffs)
13 human 7363 UGT2B4 UDP glucuronosyltransferase... NM_001297616.1 67.5% 62.1% (many diffs)
14 human 54490 UGT2B28 UDP glucuronosyltransferase... XM_017008303.1 67% 61.4% (many diffs)
15 human 7363 UGT2B4 UDP glucuronosyltransferase... NM_001297615.2 62% 57.4% (many diffs)
16 human 54490 UGT2B28 UDP glucuronosyltransferase... NM_001207004.2 56.8% 51.2% (many diffs)
17 human 7364 UGT2B7 UDP glucuronosyltransferase... NM_001349568.1 52.8% 52.1% 0_1ins747;826delA
18 human 7365 UGT2B10 UDP glucuronosyltransferase... NM_001290091.2 50.1% 48.5% (many diffs)
19 human 10720 UGT2B11 UDP glucuronosyltransferase... XM_017007660.2 49.6% 47.6% (many diffs)
20 human 101929773 LOC101929773 UDP-glucuronosyltransferase... XM_005275640.3 34.7% 33.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1653
ORF length:
1587
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC TGTGAAATGG ACTTCAGTAA TTTTGCTAAT ACAACTGAGC TTTTGCTTTA
121GCTCTGGGAA TTGTGGAAAG GTGCTGGTGT GGGCAGCAGA ATACAGCCAT TGGATGAATA
181TAAAGACAAT CCTGGATGAG CTTATTCAGA GAGGTCATGA GGTGACTGTA CTGGCATCTT
241CAGCTTCCAT TCTTTTTGAT CCCAACAACT CATCCGCTCT TAAAATTGAA ATTTATCCCA
301CATCTTTAAC TAAAACTGAG TTGGAGAATT TCATCATGCA ACAGATTAAG AGATGGTCAG
361ACCTTCCAAA AGATACATTT TGGTTATATT TTTCACAAGT ACAGGAAATC ATGTCAATAT
421TTGGTGACAT AACTAGAAAG TTCTGTAAAG ATGTAGTTTC AAATAAGAAA TTTATGAAAA
481AAGTACAAGA GTCAAGATTT GACGTCATTT TTGCAGATGC TATTTTTCCC TGTAGTGAGC
541TGCTGGCTGA GCTATTTAAC ATACCCTTTG TGTACAGTCT CAGCTTCTCT CCTGGCTACA
601CTTTTGAAAA GCATAGTGGA GGATTTATTT TCCCTCCTTC CTACGTACCT GTTGTTATGT
661CAGAATTAAC TGATCAAATG ACTTTCATGG AGAGGGTAAA AAATATGATC TATGTGCTTT
721ACTTTGACTT TTGGTTCGAA ATATTTGACA TGAAGAAGTG GGATCAGTTT TATAGTGAAG
781TTCTAGGAAG ACCCACTACA TTATCTGAGA CAATGGGGAA AGCTGACGTA TGGCTTATTC
841GAAACTCCTG GAATTTTCAG TTTCCATATC CACTCTTACC AAATGTTGAT TTTGTTGGAG
901GACTCCACTG CAAACCTGCC AAACCCCTGC CTAAGGAAAT GGAAGACTTT GTACAGAGCT
961CTGGAGAAAA TGGTGTTGTG GTGTTTTCTC TGGGGTCAAT GGTCAGTAAC ATGACAGAAG
1021AAAGGGCCAA CGTAATTGCA TCAGCCCTGG CCCAGATCCC ACAAAAGGTT CTGTGGAGAT
1081TTGATGGGAA TAAACCAGAT ACCTTAGGTC TCAATACTCG GCTCTACAAG TGGATACCCC
1141AGAATGACCT TCTAGGTCAT CCAAAGACCA GAGCTTTTAT AACTCATGGT GGAGCCAATG
1201GCATCTACGA GGCAATCTAC CATGGGATCC CTATGGTGGG GATTCCATTG TTTGCCGATC
1261AACCTGATAA CATTGCTCAC ATGAAGGCCA GGGGAGCAGC TGTTAGAGTG GACTTCAACA
1321CAATGTCGAG TACAGACTTG CTGAATGCAT TGAAGAGAGT AATTAATGAT CCTTCATATA
1381AAGAGAATGT TATGAAATTA TCAAGAATTC AACATGATCA ACCAGTGAAG CCCCTGGATC
1441GAGCAGTCTT CTGGATTGAA TTTGTCATGC GCCACAAAGG AGCTAAACAC CTTCGGGTTG
1501CAGCCCACGA CCTCACCTGG TTCCAGTACC ACTCTTTGGA TGTGATTGGG TTCCTGCTGG
1561TCTGTGTGGC AACTGTGATA TTTATCGTCA CAAAATGTTG TCTGTTTTGT TTCTGGAAGT
1621TTGCTAGAAA AGCAAAGAGG GAAAAAATGA TTACCCAACT TTCTTGTACA AAGTtggcat
1681tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)