Construct: ORF ccsbBroadEn_14797

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018849.1_s300c1, BRDN0000458145
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
PRKG1 (5592)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5592 PRKG1 protein kinase cGMP-depende... NM_006258.4 99.8% 63.4% (many diffs)
2 human 5592 PRKG1 protein kinase cGMP-depende... NM_001098512.3 91.6% 52.5% (many diffs)
3 human 5592 PRKG1 protein kinase cGMP-depende... XM_017016412.1 85.7% 48.5% (many diffs)
4 human 5592 PRKG1 protein kinase cGMP-depende... XM_017016413.1 85% 48.2% (many diffs)
5 human 5592 PRKG1 protein kinase cGMP-depende... XM_011539952.2 57.4% 81.8% (many diffs)
6 human 5592 PRKG1 protein kinase cGMP-depende... XM_024448078.1 41.1% 4.8% (many diffs)
7 mouse 19091 Prkg1 protein kinase, cGMP-depend... NM_011160.3 93% 63.1% (many diffs)
8 mouse 19091 Prkg1 protein kinase, cGMP-depend... NM_001013833.3 85.6% 52.3% (many diffs)
9 mouse 19091 Prkg1 protein kinase, cGMP-depend... XM_006526768.3 85.6% 52.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
98
ORF end:
1454
ORF length:
1356
Sequence:
1ATGGATTTTA TTTTGACTGA TAGTGACCTG TTCGTTGCAA CAAATTGATG AGCAATGCTT
61TTTTATAATG CCAACTTTGT ACAAAAAAGT TGGCACCATG GGCACCTTGC GGGATTTACA
121GTACGCGCTC CAGGAGAAGA TCGAGGAGCT GAGGCAGCGG GATGCTCTCA TCGACGAGCT
181GGAGCTGGAG TTGGATCAGA AGGACGAACT GATCCAGAAG CTGCAGAACG AGCTGGACAA
241GTACCGCTCG GTGATCCGAC CAGCCACCCA GCAGGCGCAG AAGCAGAGCG CGAGCACCTT
301GCAGGGCGAG CCGCGCACCA AGCGGCAGGC GATCTCCGCC GAGCCCACCG CCTTCGACAT
361CCAGGATCTC AGCCATGTGA CCCTGCCCTT CTACCCCAAG AGCCCACAGT CCAAGGATCT
421TATAAAGGAA GCTATCCTTG ACAATGACTT TATGAAGAAC TTGGAGCTGT CGCAGATCCA
481GGAGATTGTG GATTGTATGT ACCCGGTGGA GTATGGCAAG GACAGTTGCA TCATCAAAGA
541AGGAGACGTG GGGTCACTGG TGTATGTCAT GGAAGATGGT AAGGTTGAAG TTACAAAAGA
601AGGTGTGAAG TTGTGTACCA TGGGTCCAGG AAAAGTGTTT GGGGAATTGG CTATTCTTTA
661CAACTGTACC CGGACAGCGA CCGTCAAGAC TCTTGTAAAT GTAAAACTCT GGGCCATTGA
721TCGACAATGT TTTCAAACAA TAATGATGAG GACAGGACTC ATCAAGCATA CCGAGTATAT
781GGAATTTTTA AAAAGCGTTC CAATATTCCA GAGCCTTCCT GAAGAGATCC TCAGCAAGCt
841tgctgatgtc cttgaagaga cccactatga aaatggagaa tatattatca ggcaaggtgc
901aagaggggac accttcttta tcatcagcaa aggaacggta aatgtcactc gtgaagactc
961accgagtgaa gacccagtct ttcttagaac tttaggaaaa ggagactggt ttggagagaa
1021agccttgcag ggggaagatg tgagaacagc aaacgtaatt gctgcagaag ctgtaacctg
1081ccttgtgatt gacagagact cttttaaaca tttgattgga gggctggatg atgtttctaa
1141taaagcatat gaagatgcag aagctaaagc aaaatatgaa gctgaagcgg ctttcttcgc
1201caacctgaag ctgtctgatt tcaacatcat tgataccctt ggagttggag gtttcggacg
1261agtagaactg gtccagttga aaagtgaaga atccaaaacg tttgcaatga agattctcaa
1321gaaacgtcac attgtggaca caagacagca ggagcacatc cgctcagaga agcagatcat
1381gcagggggct cATTCCGATT TCATAAGTGA GACTGTACAA GAACATTTAA GGACAGCAAA
1441TATTTGTATA TGTTGATGGA AGCTGTCTAG GTGGAGAGCT CTGGACCATT CTCAGGGATA
1501GAGGTTCGTT TGAAGATTCT ACAACCAGAT TTTACACAGC ATGTGTGGTA GAAGCTTTTG
1561CCTATCTGCA TTCCAAAGGA ATCATTTACA GGGACCTCAA GCCAGAAAAT CTCATCCTAG
1621ATCACCGAGG TTATGCCAAA CTGGTTGATT TTGGCTTTGC AAAGAAAATA GGATTTGGAA
1681AGAAAACATG GACTTTTTGT GGGACTCCAG AGTATGTAGC CCCAGAGATC ATCCTGAACA
1741AAGGCCATGA CATTTCAGCC GACTACTGGT CACTGGGAAT CCTAATGTAT GAACTCCTGA
1801CTGGCAGCCC ACCTTTCTCA GGCCCAGATC CTATGAAAAC CTATAACATC ATATTGAGGG
1861GGATTGACAT GATAGAATTT CCAAAGAAGA TTGCCAAAAA TGCTGCTAAT TTAATTAAAA
1921AACTATGCAG GGACAATCCA TCAGAAAGAT TAGGGAATTT GAAAAATGGA GTAAAAGACA
1981TTCAAAAGCA CAAATGGTTT GAGGGCTTTA ACTGGGAAGG CTTAAGAAAA GGTACCTTGA
2041CACCTCCTAT AATACCAAGT GTTGCATCAC CCACAGACAC AAGTAATTTT GACAGTTTCC
2101CTGAGGACAA CGATGAACCA CCACCTGATG ACAACTCAGG ATGGGATATA GACTTCTTGC
2161CAACTTTCTT GTACAAAGTT GGCATTATAA GAAAGCATTG CTTATCAATT TGTTGCAACG
2221AACAGGTCAC TATCAGTCAA AATAAAATCA TTATTGCCAT CCAGCTGT

Download FASTA (ORF) (Full)

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