Construct: ORF TRCN0000469925

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008952.1_s317c1
Derived from:
ccsbBroadEn_13660
DNA Barcode:
TGAGAACACATCCGGTCGACACGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AQP7P2 (389756)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469925
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447732.1 52.1% 35.7% 153_154insC;202_260del;314_486del
2 human 364 AQP7 aquaporin 7 XM_024447539.1 44.8% 30.4% (many diffs)
3 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_017005469.2 41% 27.6% (many diffs)
4 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_017005468.2 39.4% 26.5% (many diffs)
5 human 364 AQP7 aquaporin 7 NM_001318156.1 37.5% 25.6% (many diffs)
6 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_005276965.5 36.7% 24.7% (many diffs)
7 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_006712884.3 36.7% 24.7% (many diffs)
8 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447730.1 35% 22.9% 1_444del;597_598insC;699_723del
9 human 364 AQP7 aquaporin 7 XM_017014706.2 32.9% 21.8% (many diffs)
10 human 364 AQP7 aquaporin 7 XM_017014701.1 32.4% 21.7% (many diffs)
11 human 364 AQP7 aquaporin 7 XM_017014702.2 32.4% 21.7% (many diffs)
12 human 364 AQP7 aquaporin 7 XM_017014704.1 32.4% 21.7% (many diffs)
13 human 364 AQP7 aquaporin 7 XM_017014705.2 32.4% 21.7% (many diffs)
14 human 364 AQP7 aquaporin 7 XM_024447537.1 32.4% 21.7% (many diffs)
15 human 364 AQP7 aquaporin 7 XM_024447538.1 32.4% 21.7% (many diffs)
16 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_017005467.1 32.4% 21.9% (many diffs)
17 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447731.1 30.8% 20.3% 1_543del;696_697insC;798_822del
18 human 364 AQP7 aquaporin 7 XM_024447535.1 29.7% 20.4% (many diffs)
19 human 364 AQP7 aquaporin 7 XM_024447536.1 29.7% 20.4% (many diffs)
20 human 364 AQP7 aquaporin 7 XM_006716765.3 28.5% 19% (many diffs)
21 human 364 AQP7 aquaporin 7 XM_011517867.2 28.5% 19% (many diffs)
22 human 112267859 LOC112267859 putative aquaporin-7-like p... XM_024447729.1 27.2% 18.8% (many diffs)
23 human 364 AQP7 aquaporin 7 NM_001318157.1 26% 17.5% (many diffs)
24 human 364 AQP7 aquaporin 7 NM_001318158.1 25.9% 17.4% (many diffs)
25 human 364 AQP7 aquaporin 7 XM_017014700.1 23.8% 15.9% (many diffs)
26 human 364 AQP7 aquaporin 7 NM_001170.3 23.7% 15.9% (many diffs)
27 human 364 AQP7 aquaporin 7 XM_005251453.3 23.7% 15.9% (many diffs)
28 human 364 AQP7 aquaporin 7 XM_011517866.3 23.7% 15.9% (many diffs)
29 human 100509620 LOC100509620 putative aquaporin-7-like p... XM_006712887.3 21.4% 14.5% (many diffs)
30 human 364 AQP7 aquaporin 7 NR_134513.1 14.8% (many diffs)
31 human 364 AQP7 aquaporin 7 NR_134514.1 13.7% (many diffs)
32 human 364 AQP7 aquaporin 7 NR_134515.1 12.6% (many diffs)
33 human 375719 AQP7P1 aquaporin 7 pseudogene 1 NR_002817.2 8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
324
ORF length:
255
Sequence:
1TTTTCTTCCA TTTCAGGTGT CGTGAGGCTA GCATCGATTG ATCAACAAGT TTGTACAAAA
61AAGTTGGCAT GCTCCAGCTG TGTCTCTTCG CCATCGTGGA CCAGGAGAAC AACCCAGCAC
121TGCCAGGAAC ACACGCACTG GTGATAGGCA TCCTCGTGGT CATCATCAGG GTGTACCATG
181GCATGAACAC AGGATATGCC ATCAATCCGT CCCGGGACCT GCCCCCCCCG CATCTTCACC
241TTCATTGCTG GTTGGGGCAA ACTGGTCTTC AGGTGGCATC ATCTACCTGG TCTTCATTGG
301CTCCACCATC CCACGGGAGC CCCTGCCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
361AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
421TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAT GAGAACACAT
481CCGGTCGACA CGTACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
541att

Download FASTA (ORF) (Full)