Construct: ORF TRCN0000471029

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010154.1_s317c1
Derived from:
ccsbBroadEn_10448
DNA Barcode:
ATGCGTCAATATGTCCGATAACAC
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UGT2B4 (7363)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471029
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7363 UGT2B4 UDP glucuronosyltransferase... NM_021139.3 99.8% 99.8% 1269A>T;1582delG
2 human 7364 UGT2B7 UDP glucuronosyltransferase... NM_001074.4 90.1% 85.2% (many diffs)
3 human 10720 UGT2B11 UDP glucuronosyltransferase... NM_001073.3 90.1% 85.6% (many diffs)
4 human 7365 UGT2B10 UDP glucuronosyltransferase... NM_001075.6 89.9% 85.2% (many diffs)
5 human 7365 UGT2B10 UDP glucuronosyltransferase... XM_017008585.2 89.4% 84.6% (many diffs)
6 human 54490 UGT2B28 UDP glucuronosyltransferase... NM_053039.2 88.9% 83.9% (many diffs)
7 human 7367 UGT2B17 UDP glucuronosyltransferase... NM_001077.3 85.6% 77.9% (many diffs)
8 human 7367 UGT2B17 UDP glucuronosyltransferase... XM_024454205.1 85.6% 77.9% (many diffs)
9 human 7366 UGT2B15 UDP glucuronosyltransferase... NM_001076.4 84.6% 78.1% (many diffs)
10 human 10720 UGT2B11 UDP glucuronosyltransferase... XM_011531550.2 76.1% 72.4% (many diffs)
11 human 7365 UGT2B10 UDP glucuronosyltransferase... NM_001144767.3 75.9% 72% (many diffs)
12 human 7363 UGT2B4 UDP glucuronosyltransferase... NM_001297616.1 73.4% 70.8% (many diffs)
13 human 7363 UGT2B4 UDP glucuronosyltransferase... NM_001297615.2 69.7% 68.7% (many diffs)
14 human 54490 UGT2B28 UDP glucuronosyltransferase... XM_017008303.1 65.5% 61.1% (many diffs)
15 human 7364 UGT2B7 UDP glucuronosyltransferase... NM_001330719.1 62.4% 57.5% (many diffs)
16 human 54490 UGT2B28 UDP glucuronosyltransferase... NM_001207004.2 55.4% 50.9% (many diffs)
17 human 10720 UGT2B11 UDP glucuronosyltransferase... XM_017007660.2 48.8% 47.8% (many diffs)
18 human 7364 UGT2B7 UDP glucuronosyltransferase... NM_001349568.1 48.7% 47.4% (many diffs)
19 human 7365 UGT2B10 UDP glucuronosyltransferase... NM_001290091.2 48.7% 47.8% (many diffs)
20 human 101929773 LOC101929773 UDP-glucuronosyltransferase... XM_005275640.3 33.7% 33% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1650
ORF length:
1584
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc tatgaaatgg acttcagctc ttctgctgat acagctgagc tgttacttta
121gctctgggag ttgtggaaag gtgctggtgt ggcccacaga attcagccac tggatgaata
181taaagacaat cctggatgaa cttgtccaga gaggtcatga ggtgactgta ttggcatctt
241cagcttccat ttctttcgat cccaacagcc catctactct taaatttgaa gtttatcctg
301tatctttaac taaaactgag tttgaggata ttatcaagca gctggttaag agatgggcag
361aacttccaaa agacacattt tggtcatatt tttcacaagt acaagaaatc atgtggacat
421ttaatgacat acttagaaag ttctgtaagg atatagtttc aaataagaaa cttatgaaga
481aactacagga gtcaagattt gatgttgttc ttgcagatgc tgttttcccc tttggtgagc
541tgctggccga gttacttaaa ataccctttg tctacagcct ccgcttctct cctggctacg
601caattgaaaa gcatagtgga ggacttctgt tccctccttc ctatgtgcct gttgttatgt
661cagaactaag tgaccaaatg actttcatag agagggtaaa aaatatgatc tatgtgcttt
721attttgaatt ttggttccaa atatttgaca tgaagaagtg ggatcagttc tacagtgaag
781ttctaggaag acccactacg ttatctgaga caatggcaaa agctgacata tggcttattc
841gaaactactg ggattttcaa tttcctcacc cactcttacc aaatgttgag ttcgttggag
901gactccactg caaacctgcc aaacccctac cgaaggaaat ggaagagttt gtccagagct
961ctggagaaaa tggtgttgtg gtgttttctc tggggtcgat ggtcagtaac acgtcagaag
1021aaagggccaa tgtaattgca tcagcccttg ccaagatccc acaaaaggtt ctgtggagat
1081ttgatgggaa taaaccagat actttaggac tcaatactcg gctgtacaag tggatacccc
1141agaatgatct tcttggtcac ccaaaaaCCA GAGCTTTTAT AACTCATGGT GGAGCCAATG
1201GCATCTATGA GGCAATCTAC CATGGAATCC CTATGGTGGG CGTTCCATTG TTTGCAGATC
1261AACCTGATAA CATTGCACAC ATGAAGGCCA AGGGAGCAGC TGTTAGTTTG GACTTCCACA
1321CAATGTCGAG TACTGACTTA CTCAATGCAC TGAAGACAGT AATTAATGAT CCTTTATATA
1381AAGAGAATGC TATGAAATTA TCAAGAATTC ATCATGATCA ACCAGTGAAG CCCCTTGATC
1441GAGCAGTCTT CTGGATTGAA TTTGTCATGC GCCATAAAGG AGCCAAGCAC CTTCGGGTTG
1501CAGCCCACGA CCTCACCTGG TTCCAGTACC ACTCTTTGGA TGTGACTGGG TTCCTGCTGG
1561CCTGTGTGGC AACTGTGATA TTCATCATCA CAAAATGTCT GTTTTGTGTC TGGAAGTTTG
1621TTAGAACAGG AAAGAAGGGG AAAAGAATTA CCCAACTTTC TTGTACAAAG TGGTTGATAT
1681CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC
1741GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGAATGCGT
1801CAATATGTCC GATAACACAC GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt
1861gaaagatt

Download FASTA (ORF) (Full)